Sequence details bmy_20566 (Coding sequence)

Part of scaffold_2538 (Scaffold)

For more information consult the page for scaffold_2538 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHAMP1 ENSBTAG00000020861 (Cow)

Gene Details

zinc finger protein 828

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027794, Cow)

Protein Percentage 92.79%
cDNA percentage 93.2%
Ka/Ks Ratio 0.21051 (Ka = 0.0369, Ks = 0.1755)

CHAMP1  (Minke Whale)

Gene Details

chromosome alignment maintaining phosphoprotein 1

External Links

Gene match (Identifier: BACU017379, Minke Whale)

Protein Percentage 99.28%
cDNA percentage 99.38%
Ka/Ks Ratio 0.25666 (Ka = 0.0034, Ks = 0.0133)

Additional orthologs identified in other species via the OPTIC pipeline.

CHAMP1 (Human)   Champ1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2748 bp    Location:17532..26271   Strand:+
Raw sequence 
>bmy_20566
TCGCCATTCGGGAGGCCGCTGCGCCGCAGGGCCTCGCGGAGCCGCCTCGGACCGCGAGCCCGGCCTCCCGCAGTCCTTCCCCGCCTGGACGCCGCCCGCGGCCCACCGGTTCAGCTGCTCATCTTTGTCCTTCACGTACTACACGCTGTCTTCTGTGGTTTAGTCGAAAAGCCATGTAGACTTGCCTGCCCTTTGAAGACCACTTTTAAGACTTCTAGTAAGACAGCTGCACTGTTTTTAAAGAATATAATCGTGTATGTTAGAAAAATGGAAGTATTCCAGGAACTTCGTAAGCCATCRGCACGTTTGGAGTGTGATCACTGCAATTTCAGAGGCACGGATTATGAAAATGTACAAATCCACATGGGTACCATCCATCCAGAATTTTGTGATGAAATGGATGCCGGTGGGTTAGGTAAAATGATATTTTACCAGAAAAGTGCAAAGCTATTTCACTGCCATAAATGCTTTTTCACCAGCAAGATGTACTCTAATGTATACTATCACATCACATCCAAACATTCAGCCCCAGAGAAATGGAATGAGAAACCAAAAAATCAGTTAAACAAAGAAGCAGATCCTGTGAAAAGCCCTTCTGTTCCTGAACACCAGAAAATGGCCTCTAATTCAGCAGAACTCCTGAAACCTATACCTGTCCTTTCCATAGAAACACAGAAATTTGGCCCAGTTATGTCTCCAGAATCACCAGAACCTACTCCTCTTACTTCCCTGGACTCTCAGAAACCTGGCCCTGTTGTTTCTCCTGAGCCACAGACACCTTCTCTTCCTTCTCCCGAGCCTCCAAAACCTGCCCCTGTTTCTTCTCCTGAACTTCCAAAACCAGTCCCTCTTGTTTCTGAATCTCAGAAACCAGTCCCTGTTCCTTCTCCAGAACCACAGAAACTTGCTCCTGTATCTCCTGAGCCAGTAAAGGCAACTCTTACTAATCCCAAACCCCAGAAACACTCCCATTTCCCAGAAACATTGGGGCCACCTTCAGCCTCATCTCCAGAGTCACCAGTTCTAGGTGCCTCCCCTGAACCTTGGGGACCATCCCCGACTGCGTCTCCAGAGTCTCGGAAGCCAGTCCGGACTGTCTCCCCTGAGCCAAGGAAGCTGTCCCCATCGGAGTCTCCTGAACCTTGGAAGCCATTCCCTGCTGTGTCCCCAGAGCCTCGGAGACCAGCCCCAGCTGTGTCACCAGGTTCTTGGAAGCCAGGGCCACCTGGGTCCCCCAGGTCTTGGAAATCCAGTCCGTCAGCATCATCAGGACCTTGGAAGCCAGCTAAACCTGCTCCATCTGTGTCTCCTGGACCTTGGAAACCAATTCCTTCTATATCACCTGGACCTTGGAAACCAACTCCATCCCTGTCACCTGCATCCTGGAAGTCTTCATCAGTCTCACCTGGTTCCTGGAAATCTCCCCCCGCATCTCCTGAGTCGTGGAAGTCTGGCCCACCAGAACTCCGAAAGACAGCTCCCACCTTGTCACCTGAACATTGGAAGACAGTTCCTCCAGTGTCTCCTGAGCTTCGTAAAGCAGGACCTCCCTTGTCTCCTGAGCTTCGCAAACCAGGCCCACCACTGTCCCCAGAGATCCGTAGTCCAGCGGGATCTCCAGAGCTCAGAAAACCCTCAGGGTCTCCAGAGCTTTGGAAGCTTTCCCCTGATCAGCGGAAAACTTCTCCTGCTTCACTTGATTTTTCTGAGTCCCAGAAAAGTTCCCGTGGTGGTTCCCCTGATCTCTGGAAGTCTTCCTTTTTTATTGAACCTCAGAAACCTGTCTTCCCTGAGACCCGGAAACCAGGTCCTTCTGGGCCATCTGAGTCCCCTAAAGCTTCCTCTGATATCTGGAAGCCTGTTCTCTCTATTGATACTGAGCCTAGAAAACCTGCCCTGTTTTCTGAGCCTACCAAAACAGCCCCTCCTGCTTCTCCTGAACCACGAAAACGTGCTCTTTTTCCAGAGCCCCGGAAACATGCCCTTTTCCCCGAACTTCCCAAAGCTGCTGTCTTCTCAGAATCTCAGAAGGCAGTTGAGCTTGGTGATGAACTACAGGCAGATGCCATAGATGATCAAAAGTGTGATGTTTTGGTTCAGGAAGAACTACTAGCTACACCTAAGAAACTCTTAGAAGACACTTTATTTCCTTCCTCAAAGAAGCTCAAGAAAGACAACCAAGAGAACTCGGATGCTGAGCTTAGTAGCAGTGAGTATATAAAAACAGATTTGGATGCGATAGATAGTAAGGGCCAAGAATCGAGCAGTGATCAAGAGCAGGTTGATGTGGAATCTATTGATTTTAGTAAAGAGAACAAAATAGACATGACTAGTCCAGAGCAGTCCAAAAATGTGCTGCAGTTTACTGAAGAAAAAGAGGCTTTTATCTCTGAAGAAGAGATTGCAAAATACATGAAGCGTGGAAAAGGAAAGTATTATTGCAAAATTTGTTGCTGTCGTGCTATGAAAAAAGGTGCTGTTTTGCATCATTTGGTTAACAAGCATAATGTCCACAGTCCTTACAAGTGTACAATTTGTGGAAAGGCTTTTCTTTTGGAATCTCTCCTTAAAAATCATGTAGCAGCTCATGGGCAAAGTTTACTTAAATGTCCACGTTGTAATTTTGAGTCAAATTTTCCAAGAGGCTTTAAGAAACATTTAACTCATTGTCAAAGCCGGCATAATGAAGAGGCAAATAAAAAGCTAATGGAAGCTCTGGAACCTCCACTGGAGGAGCAGCAAATTTGA

Related Sequences

bmy_20566T0 Protein

Length: 916 aa      View alignments
>bmy_20566T0
SPFGRPLRRRASRSRLGPRARPPAVLPRLDAARGPPVQLLIFVLHVLHAVFCGLVEKPCRLACPLKTTFKTSSKTAALFLKNIIVYVRKMEVFQELRKPSARLECDHCNFRGTDYENVQIHMGTIHPEFCDEMDAGGLGKMIFYQKSAKLFHCHKCFFTSKMYSNVYYHITSKHSAPEKWNEKPKNQLNKEADPVKSPSVPEHQKMASNSAELLKPIPVLSIETQKFGPVMSPESPEPTPLTSLDSQKPGPVVSPEPQTPSLPSPEPPKPAPVSSPELPKPVPLVSESQKPVPVPSPEPQKLAPVSPEPVKATLTNPKPQKHSHFPETLGPPSASSPESPVLGASPEPWGPSPTASPESRKPVRTVSPEPRKLSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRSWKSSPSASSGPWKPAKPAPSVSPGPWKPIPSISPGPWKPTPSLSPASWKSSSVSPGSWKSPPASPESWKSGPPELRKTAPTLSPEHWKTVPPVSPELRKAGPPLSPELRKPGPPLSPEIRSPAGSPELRKPSGSPELWKLSPDQRKTSPASLDFSESQKSSRGGSPDLWKSSFFIEPQKPVFPETRKPGPSGPSESPKASSDIWKPVLSIDTEPRKPALFSEPTKTAPPASPEPRKRALFPEPRKHALFPELPKAAVFSESQKAVELGDELQADAIDDQKCDVLVQEELLATPKKLLEDTLFPSSKKLKKDNQENSDAELSSSEYIKTDLDAIDSKGQESSSDQEQVDVESIDFSKENKIDMTSPEQSKNVLQFTEEKEAFISEEEIAKYMKRGKGKYYCKICCCRAMKKGAVLHHLVNKHNVHSPYKCTICGKAFLLESLLKNHVAAHGQSLLKCPRCNFESNFPRGFKKHLTHCQSRHNEEANKKLMEALEPPLEEQQI*