Part of scaffold_2588 (Scaffold)

For more information consult the page for scaffold_2588 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM7 ENSTTRG00000008024 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007592, Bottlenosed dolphin)

Protein Percentage 80.51%
cDNA percentage 80.58%
Ka/Ks Ratio 0.15263 (Ka = 0.0177, Ks = 0.1158)

TRIM7 ENSBTAG00000020954 (Cow)

Gene Details

tripartite motif-containing protein 7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027907, Cow)

Protein Percentage 94.7%
cDNA percentage 92.73%
Ka/Ks Ratio 0.07833 (Ka = 0.0264, Ks = 0.3364)

TRIM7  (Minke Whale)

Gene Details

tripartite motif containing 7

External Links

Gene match (Identifier: BACU004874, Minke Whale)

Protein Percentage 88.03%
cDNA percentage 90.79%
Ka/Ks Ratio 0.32772 (Ka = 0.0741, Ks = 0.2261)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1419 bp    Location:84832..73677   Strand:-
>bmy_20578
ATGGCGGCGGTGGGGCCGCGGACTGGCCCGGGCGCCGGGGCCGAGGCGCTGGCGCTGGCGGTAGAGCTGCAGGGCGAGGCGACCTGCTCCATCTGCCTGGAGCTCTTCCGGGAGCCGGTGTCCGTCGAGTGCGGCCACAGCTTCTGCCGCGCCTGCATCGCGCGCTGCTGGGAGCGCCCGGGCGCCGGGGCCACCGCCGCGTCCCACAAGTTGTCCTGCTCGCTGCCCTGCCCGCAGTGTCGCGAGCCCGCGCGCCCGGGCCAGCTGCGGCCCAACCGGCAGCTGGCTGCGGTGGCCACGCTGCTGCGGCGCTTCAGCCTGCCAGCGGGCGCGCAGGGGGAACGCGGGCCTCCGGAGGCGGTGGCGGCCGGGTGCCCGCAGCACCGCGAACCGCTCAAGCTCTACTGCCAGGACGATGGACGTGCCATTTGCGTGGTGTGCGACCGCGCCCGCGAGCACCGCGCTCACGCCGTGTTACCCCTGGACGAGGCGGTGCAGGAGGCCAAGGAGCTCCTGGAGTCCAGGCTGAAGGTCTTGAAGAAGGATCTGGAGGACTATGAGGCGTTTCGTTCCACCGAAGAGAAGGAGAGCAAGGACCTCCTGAAGCAGATGGCGGCCGAGAGAGAGAAGGTTGGGGCGGAGTTCCAGGCTCTGCGGGCCTTCCTGGTGGAGCAGGAGGGCCGGCTCCTGGGCCGCCTGGAGGAGCTGTCCCGGGAGGTGACACAGAAACAGAATGAGAACCTGGCCCAGCTTGGGGGAATTCAAAAACACACTAAGCAGCCAACCACAGTCTCTTCTGAGATGAAGAATAAAGTCTGGAATGTTTCTCTCAAGACCTTTGTCTTAAAGGGGCTGCTCAAGAAGTTCAGAGAGGATCTTCGGGGAGAACTGGAGAAAGAGGAAAAAGTGGAGCTGACCTTGGACCCCGACACGGCCAACCCCCGCCTCATCCTCTCTCTGGATCTTAAGAGCGTGCGCCTTGGACAGCGGGCCCAGGACCTGCCCAGCCACCCGCGCCGCTTCGACACCAACACGCGAGTTCTGGCATCCTGCGGTTTCTCCTCCGGGAGGCACCACTGGGAGGTGCAAGTGGGCTCCAAGGACGGCTGGGCCTTCGGCGTGGCACGTGAGAGCGTGCGCCGCAAGGGCCTCACGCCCTTCACCCCCGAGGAGGGCGTCTGGGCGCTGCAGCTCAACAGCGGGCAGTACTGGGCGGTGACCAGCCCTGAAAGGACGCCCCTCAGCTGTGGGCACCTGTCCCGCGTGCGGGTCGCCCTGGACCTGGAGGTGGGGGCCGTGTCCTTCTATGCTGCGGAGGACATGCACCACATCTACACCTTCCGTGTCAACTTCCAAGACCGCGTGTTCCCCCTTTTCTCTGTCTGCTCCACTGGCACCTACTTGCGAATCTGGCCTTGA

Related Sequences

bmy_20578T0 Protein

Length: 473 aa      View alignments
>bmy_20578T0
MAAVGPRTGPGAGAEALALAVELQGEATCSICLELFREPVSVECGHSFCRACIARCWERPGAGATAASHKLSCSLPCPQCREPARPGQLRPNRQLAAVATLLRRFSLPAGAQGERGPPEAVAAGCPQHREPLKLYCQDDGRAICVVCDRAREHRAHAVLPLDEAVQEAKELLESRLKVLKKDLEDYEAFRSTEEKESKDLLKQMAAEREKVGAEFQALRAFLVEQEGRLLGRLEELSREVTQKQNENLAQLGGIQKHTKQPTTVSSEMKNKVWNVSLKTFVLKGLLKKFREDLRGELEKEEKVELTLDPDTANPRLILSLDLKSVRLGQRAQDLPSHPRRFDTNTRVLASCGFSSGRHHWEVQVGSKDGWAFGVARESVRRKGLTPFTPEEGVWALQLNSGQYWAVTSPERTPLSCGHLSRVRVALDLEVGAVSFYAAEDMHHIYTFRVNFQDRVFPLFSVCSTGTYLRIWP*