Part of scaffold_2588 (Scaffold)

For more information consult the page for scaffold_2588 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM41 ENSTTRG00000008027 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 41

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007594, Bottlenosed dolphin)

Protein Percentage 87.56%
cDNA percentage 87.45%
Ka/Ks Ratio 0.06757 (Ka = 0.003, Ks = 0.0448)

TRIM41 ENSBTAG00000019646 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRIM41

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026179, Cow)

Protein Percentage 98.13%
cDNA percentage 96.26%
Ka/Ks Ratio 0.05176 (Ka = 0.0081, Ks = 0.1573)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1893 bp    Location:100547..109106   Strand:+
>bmy_20580
ATGGCTGCCGTTGCCATGGCACCCAACCCTGTGCAGACCCTTCAGGAGGAGGCGGTGTGCGCCATCTGCCTCGATTACTTCACGGACCCTGTGTCCATCGGCTGCGGGCACAACTTCTGCCGAGTGTGTGTAACCCAACTGTGGGGAGGGGAGGATGAAGAGGACAGGGATGAGTTAGACCGGGAGGAAGAGGAGGAGGACGGAGAGGAGGAGGAAGTGGAGGCTGTGGGGGCCGGTGGGGGGTGGGACACCCCCATGCGGGATGAAGACTATGAGGGCGACATGGAGGAGGAAGTCGAAGAGGAAGAGGAGGGTGTGTTCTGGACCAGTGGCATGGGCGGGTCCAACTGGGAAAACATGGACTACGTGTGGGAGGAGGAGGACGAGGAGGAAGACCTGGACTACTACTTGGGGAACGTGGAGGGGGACCTGAGGGGGGAGGATGAGGAGGATGAGGAGGAAGTGCTGGAGGAGGACGAGGAAGAGGAGCTCGATCCCGTCACCCCACTGCCCCCGCCTCCAGCCCCTCGGAGGTGCTTCACCTGCCCCCAGTGCCGCAAGAGCTTTCCCAGGCGGAGCTTCCGCCCCAACCTGCAGCTGGCCAACATGGTCCAGGTGATTCGGCAGATGCACCCAACCCCTGGTCGAGGGAGCCGTGGGAACGAGCAGGGCATTTGTCCCAAACACCAAGAAGCCCTGAAGCTCTTTTGCGAGGTGGATGAAGAAGCTATCTGTGTGGTGTGCCGAGAATCCAGGAGCCACAAACAGCACAGCGTGGTGCCATTGGAGGAGGTGGTGCAGGAGTACAAGGCCAAACTGCAGGGGCATGTGGAACCACTGAGGAAGCACTTGGAGGCTGTGCAGAAGATGAAGGCCAAGGAGGAGAGGCGGGTGACAGAGTTGAAGAGCCAGATGAAGTCAGAGCTGGCAGCTGTGGCCTCAGAATTTGGGCGGCTGACACGGTTTCTGGCCGAAGAGCAGGCAGGGCTAGAGCGGCGCCTCCGAGAGATGCACGAAGCTCAGCTGGGGCGCGCGGGAGCAGCTGCCAGCCGCCTCTCCGAGCAGGCTGCCCAGCTGAGCCGCCTGCTGGCTGAGGCCCAGGAGCGGAGCCAGCAGGGGGGCCTGCGGCTGCTCCAGGACATCAAGGAGACTTTCAATAGGTGTGAAGAGGTACAGCTGCAGCCCCCGGAGGTCTGGTCCCCTGACCCGTGTCAACCCCATAGCCATGACTTCCTGACAGACGCCATCGTGAGGAAAATGAGCCGGATGTTCTGTCAGGCTGCCCGAGTGGACCTGACGCTGGACCCTGACACGGCTCACCCGGCCCTGATGCTGTCCCCTGACCGCCGGGGGGTCCGCCTGGCAGAGCGGCGGCAGGAGGTTGCTGACCATTCCAAGCGCTTCTCTGCAGACTGCTGCGTGCTGGGGGCCCAGGGCTTCCGCTCTGGCCGGCACTACTGGGAGGTAGAGGTGGGCGGGCGGCGGGGCTGGGCAGTGGGTGCTGCCCGAGAATCAACCCATCATAAGGAGAAGGTGGGCTCTGGGGGGTCCTCTGTGGGCAGCGGTGATGCCAGCTCCTCCTCTCGCCATCACCACCGCCGCCGCCGGCTCCACCTGCCCCAGCAGCCCCTGCTCCAGCGGGAAGTGTGGTGTGTGGGCACCAATGGCAAACGCTACCAGGCACAGAGCTCAACGGAGCAGACACTGCTGAGCCCAAGTGAGAAACCAAGGCGCTTTGGTGTGTACCTGGACTATGAGGCCGGGCGCCTGGGCTTCTACAATGCAGAGACTCTGGCTCACGTGCACACCTTTTCGGCTGCCTTCCTGGGCGAGCGTGTCTTCCCTTTCTTCCGGGTGCTCTCCAAGGGTACCCGTATCAAGCTCTGCCCTTGA

Related Sequences

bmy_20580T0 Protein

Length: 631 aa      View alignments
>bmy_20580T0
MAAVAMAPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELDREEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMGGSNWENMDYVWEEEDEEEDLDYYLGNVEGDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRGNEQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGRAGAAASRLSEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHSKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVGSGGSSVGSGDASSSSRHHHRRRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFGVYLDYEAGRLGFYNAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP*