Part of scaffold_2533 (Scaffold)

For more information consult the page for scaffold_2533 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COPS4 ENSTTRG00000007688 (Bottlenosed dolphin)

Gene Details

COP9 signalosome subunit 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007272, Bottlenosed dolphin)

Protein Percentage 91.39%
cDNA percentage 91.39%
Ka/Ks Ratio 0.07962 (Ka = 0.0024, Ks = 0.03)

COPS4 ENSBTAG00000006950 (Cow)

Gene Details

COP9 signalosome complex subunit 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009128, Cow)

Protein Percentage 99.75%
cDNA percentage 97.22%
Ka/Ks Ratio 0.01036 (Ka = 0.0012, Ks = 0.1123)

COPS4  (Minke Whale)

Gene Details

COP9 signalosome subunit 4

External Links

Gene match (Identifier: BACU002011, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.41%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0173)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1188 bp    Location:42793..6444   Strand:-
>bmy_20584
ATGGCGGCAGCCGTGCGACAGGATTTGGCCCAGCTCATGAATTCGAGCGGCTCTCATAAAGATCTGGCGGGCAAGTATCGTCAGATCCTGGAAAAAGCCATTCAGTTATCTGGGGCAGAACAACTAGAAGCTTTGAAAGCTTTTGTGGAAGCAATGGTAAATGAGAATGTCAGCCTCGTGATCTCTCGCCAGTTGCTGACTGATTTTTGCACACATCTCCCTAACCTACCTGATAGCACAGCCAAAGAAATCTATCATTTCACCTTGGAAAAGATCCAGCCTAGAGTCATTTCATTTGAGGAGCAGGTTGCTTCCATAAGACAGCATCTTGCATCCATATATGAAAAAGAAGAAGATTGGAGAAATGCAGCCCAAGTACAGTACAATGTAGATTATAAACTGGAGACATACCTGAAGATTGCTAGGCTATATCTGGAGGATGATGATCCAGTCCAGGCAGAGGCTTACATAAATCGGGCATCATTGCTTCAGAATGAATCAACCAATGAACAGTTACAGATACATTATAAGGTATGCTATGCACGTGTTCTTGATTATAGAAGAAAATTCATTGAAGCTGCACAAAGGTACAATGAGCTCTCTTACAAGACAATAGTGCACGAAAGTGAAAGACTAGAGGCCTTAAAACATGCTCTGCACTGTACCATCTTAGCATCAGCAGGACAGCAGCGTTCTCGGATGCTTGCTACTCTTTTTAAGGATGAAAGGTGCCAGCAACTTGCTGCTTATGGAATCCTCGAGAAAATGTACCTAGATAGGATCATCAGAGGAAATCAACTTCAAGAATTTGCTGCCATGCTGATGCCTCACCAGAAAGCAACTACAGCTGACGGTTCTAGCATCTTGGACAGAGCTGTTATTGAACACAATTTATTGTCTGCAAGCAAATTATATAATAATATTACCTTTGAGGAACTTGGAGCCCTTTTAGAGATTCCTGCAGCTAAGGCAGAAAAGATAGCATCGCAAATGATAACAGAAGGACGTATGAATGGATTTATTGATCAGATTGATGGAATAGTTCATTTTGAAACACGAGAAGCCCTGCCAACATGGGACAAACAGATCCAATCGCTTTGTTTCCAAGTGAATAACCTTTTGGAGAAAATCAGTCAGACAGCACCAGAATGGACAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGA

Related Sequences

bmy_20584T0 Protein

Length: 396 aa      View alignments
>bmy_20584T0
MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDWRNAAQVQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQQRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAMEAQMAQ*