Part of scaffold_2546 (Scaffold)

For more information consult the page for scaffold_2546 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HHLA2 ENSTTRG00000012150 (Bottlenosed dolphin)

Gene Details

HERV-H LTR-associating 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011512, Bottlenosed dolphin)

Protein Percentage 84.68%
cDNA percentage 87.89%
Ka/Ks Ratio 0.68841 (Ka = 0.0633, Ks = 0.0919)

HHLA2 ENSBTAG00000018397 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024479, Cow)

Protein Percentage 75.68%
cDNA percentage 84.58%
Ka/Ks Ratio 0.533 (Ka = 0.1462, Ks = 0.2742)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1002 bp    Location:145479..156664   Strand:+
>bmy_20590
ATGACCAGTTGGAAAAGCAAGATCCCAGATATTCATGTTAGTATGAGTGAGCAAATAGTCATTGGAAGACTTGATGAAGATGTAATTCTCCCTTGCTCATTTGAGAGTGGGCCTGATGTTGTAGTTCACTGGMAGAATCAAGRTAACTACGTTTACTCATACTACAAAGACAGTGACCAGTTGGAAAAGCAAGATCCCAGATATGTAAATAGGACATCCCTCTTCCACGGTGAAATTCACAATGGGAATGCCTCCCTATCTTTCAAAAGATTAAAGCTTCAGGATGAAGGAATTTACATATGCTATGTGGGAACATCACCTGGAAAARTCATAAACAAAGTGGTACTAAAAGTGGGAGCTTTTGTCACACCTGTGATGAAGTATGAAAAGAACGCCACAAACAGCTTCTTAATATGCAAYGTGTTAAGTGTTTATCCTTATCCAATTATCACATGGAAAGTGGATAATACACCTATCTCTGAAAACAATAAGGAAGAAGTCGGATCTTTGGGTCCTTTTTATATTAACAGTAGAGTAAATATTACAGGATCAAATTCATCTTATCAATGTACTATTGAAAACACATTGCTGAAGCAAACATGGACAGGGAGATGGACAATGAAAGATGGCCTTCGTAAAATGCAAAGTGAAAACGTTTCACTCTCGTGTAAACCTGAAAACAGTTTTTTCCTACCAAATCAAGATTTCATAGTCATTTGGTCCAGAGTGGACAGTGGGAATTCTTTGGTCCTGGCTTACTTTCTGAACTCCTCACAAGAAACAATTATCATTGAACCCCTACTTTCACGGAACAAAGAGCTGATAAACCTGCATGACTTCTCTTTGACTTTGAAGGATCTTCGTCTTTCAGACAGTGGGGAATACTTGTGCAATATTTCTTCAAGCAAGTATACTTTACTCACCATCCAAACACTGCATGTAGGGTTTCAGGGCTTCAGAAATGAAGAGGGAACCTATATGTTTTGTTACTCTGTGGGCTGA

Related Sequences

bmy_20590T0 Protein

Length: 334 aa      View alignments
>bmy_20590T0
MTSWKSKIPDIHVSMSEQIVIGRLDEDVILPCSFESGPDVVVHWXNQXNYVYSYYKDSDQLEKQDPRYVNRTSLFHGEIHNGNASLSFKRLKLQDEGIYICYVGTSPGKXINKVVLKVGAFVTPVMKYEKNATNSFLICNVLSVYPYPIITWKVDNTPISENNKEEVGSLGPFYINSRVNITGSNSSYQCTIENTLLKQTWTGRWTMKDGLRKMQSENVSLSCKPENSFFLPNQDFIVIWSRVDSGNSLVLAYFLNSSQETIIIEPLLSRNKELINLHDFSLTLKDLRLSDSGEYLCNISSSKYTLLTIQTLHVGFQGFRNEEGTYMFCYSVG*