Part of scaffold_2551 (Scaffold)

For more information consult the page for scaffold_2551 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMPRSS11D ENSTTRG00000007818 (Bottlenosed dolphin)

Gene Details

transmembrane protease, serine 11D

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007389, Bottlenosed dolphin)

Protein Percentage 74.84%
cDNA percentage 85.48%
Ka/Ks Ratio 1.04749 (Ka = 0.1463, Ks = 0.1397)

TMPRSS11D ENSBTAG00000001925 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002505, Cow)

Protein Percentage 71.94%
cDNA percentage 82.26%
Ka/Ks Ratio 0.78452 (Ka = 0.1949, Ks = 0.2485)

TMPRSS11D  (Minke Whale)

Gene Details

transmembrane protease, serine 11D

External Links

Gene match (Identifier: BACU015718, Minke Whale)

Protein Percentage 73.87%
cDNA percentage 83.55%
Ka/Ks Ratio 0.88295 (Ka = 0.1839, Ks = 0.2083)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 933 bp    Location:80053..65207   Strand:-
>bmy_20604
ATGAGAGCATCAAAACCAAATGTGCCTAATGCACATTCATTTTCAGAAAAGGAGAGCACCAAAATTAGGCAAAGCGGTAATGATGTGATAGCAGATATTGTCATGAAATTTAAATTCACCAGGAATAACAATGGACCATCAGTGAAAAGCAGAATTGAGTCTGTTTTACGCCAAATGCTGAATAATTCTGGAAACTTGCACATTAATTCCCTTTTCCCATTAGAATGTGGGCTCCGTCCAGACCTAATAACATTGTCTGCCGAGAGAATCATAGGAGGCACWAAAGCTAAGGAAGGAGACTGGCCATGGCAAGTCAGTTTACAGTGGAGTGGTGTTCACCACTGTGGAGGTGTCTTGATCAGTAACAGCCACTCTGATACTCTTCAATGGACTGTCACCTTTGGTATCTCCATAACATTTCCTAAAGAGAGAAGAGGAGTAAGGACTATTTTAATCCATAACAATTATAAACCTGAAACTCATGAAAATGATATTGCACTTTTACAACTTGATAGAGAAGTCACCTTTACCAGAGATATCCATACGGTGTGCCTCCCAGAGGCTAGCCAGAATATTCCACCTGGTTCCACTGCTTATGTAACAGGATGGGGATCTCAAAAATACACCGGCAGCACAGTTCCATATCTAGAACAAGCACGGGTCAAAATAATAAGTAATAGTGTATGTAATGCACCATCTAGTTATAATGGAGCCATCTTGCCTGGAATGATATGTGCTGGACTACCTCAAGGTGGAGCGGATGCATGCCAGGGGGACTCTGGTGGCCCACTAGTACAAGAAGACGAACGGCACCTCTGGTTCCTCGTGGGGATAGTAAGCTGGGGGTATAAGTGTGGTCTGCCAGATAAGCCAGGAGTGTATACTCTAGTGACAGCCTACCGTGACTGGATAAAACAACACGCTGAGATCTAG

Related Sequences

bmy_20604T0 Protein

Length: 311 aa      View alignments
>bmy_20604T0
MRASKPNVPNAHSFSEKESTKIRQSGNDVIADIVMKFKFTRNNNGPSVKSRIESVLRQMLNNSGNLHINSLFPLECGLRPDLITLSAERIIGGTKAKEGDWPWQVSLQWSGVHHCGGVLISNSHSDTLQWTVTFGISITFPKERRGVRTILIHNNYKPETHENDIALLQLDREVTFTRDIHTVCLPEASQNIPPGSTAYVTGWGSQKYTGSTVPYLEQARVKIISNSVCNAPSSYNGAILPGMICAGLPQGGADACQGDSGGPLVQEDERHLWFLVGIVSWGYKCGLPDKPGVYTLVTAYRDWIKQHAEI*