Sequence detailsbmy_20615 (Coding sequence)

Part of scaffold_2559 (SequenceType object (1))

For more information consult the page for scaffold_2559 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.65438ENSBTAG00000047834 (Cow)

Gene Details

protein EFR3 homolog A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010169, Cow)

Protein Percentage 96.81%
cDNA percentage 95.22%
Ka/Ks Ratio 0.12248 (Ka = 0.0177, Ks = 0.1443)

EFR3A (Minke Whale)

Gene Details

EFR3 homolog A (S. cerevisiae)

External Links

Gene match (Identifier: BACU013250, Minke Whale)

Protein Percentage 88.54%
cDNA percentage 90.73%
Ka/Ks Ratio 0.60149 (Ka = 0.0877, Ks = 0.1457)

Additional orthologs identified in other species via the OPTIC pipeline.

EFR3A (Human)   Efr3a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2664 bp    Location:180270..119185   Strand:-
Raw sequence 
>bmy_20615
CCCATAAATATTCAGCAACGTGAATTCCGAGGTCGGGTTACAGTACGAATAATCTCTGTACTTGGTGATTTTATTCTCTTTGAACAGGAGTGTGTTGCTGCTGTTCTGCTTTGCGTCCTCGCTACAAGCGCCTGGTGGACAACATCTTCCCTGAAGACCCAAAAGAATCTGGAACATATGATTACTGAAGATAAGGTGGAGCGCAGATTATGGAGGAATGTGAATGACAGACAAGGCATCTACTTTATGCCCTTTAACTTACAGGCAGATGGCCTTGTTAAAGCTGATATGGAGAAATTGACATTTTATGCTGTATCTGCTCCAGAGAAACTGGATCGAATTGGTTCTTACCTGGCAGAAAGGTTGAGCAGGGATGTTGTCAGACATCGTTCTGGGTATGTTTTAATTGCTATGGAGGCATTGGACCAACTTCTTATGGCCTGCCATTCTCAAAGCATCAAGCCATTTGTAGAAAGCTTTCTTCATATGGTAGCAAAGCTGCTGGAATCAGGGGAACCAAAGCTTCAAGTTCTTGGAACAAATTCTTTTGTCAAATTTGCAAATATTGAAGAAGACACACCGTCCTATCATAGACGTTATGATTTTTTTGTATCTCGCTTCAGTGCCATGTGTCACTCCTGTGATAGTGATCCAGAAACACGAACAGAAATCCGAATTGCTGGAATCAGAGGTATTCAAGGTGTGGTTCGCAAAACAGTTAATGATGAACTTCGGGCTACCATTTGGGAACCCCAGCATATGGATAAAATTGTTCCATCCTTGCTGTTTAACATGCAAAAGATAGAAGAGGTTGACAGTCGCATAGGCCCTCCTCCTTCTCCTTCAGCAGCTGACAAAGAAGAGAATCCCGCCGTGCTGGCTGAAAACTGCTTCAGAGAACTGCTGGGCCGAGCAACTTTTGGGAATATGAATAATGCTGTGAGACCAGTTTTTGCGCATTTAGATCATCACAGACTATGGGATCCCAATGAATTTGCAGTTCACTGCTTTAAAATTATAATGTATTCCATTCAGGCTCAGTATTCTCACCATGTGATCCAGGAGATTCTAGGACACCTTGATGCTCGTAAAAAAGATTCTCCACGAGTTCGAGCAGGTATTATTCAGGTTCTGTTAGAGGCTGTTGCCATTGCTGCTAAAGGTTCCATAGGACCCACAGTGCTGGAAGTCTTTAACACCCTATTGAAGCATCTGCGTCTCAGTGTTGAATTTGAAGCAAATGATTTACAGGGAGGATCTGTAAGCAGTGCCAACTTAAACACAAGTTCCAAAGACAATGATGAGAAGATTGTGCAGAATGCTATCATCCAAACAATAGGATTTTTTGGAAGTAACCTACCAGATTATCAGAGGTCAGAAATCATGATGTTCATTATGGGGAAAGTACCCGTCTTTGGAACATCCACCCATACTTTGGATATCAGTCAACTAGGGGATTTGGGAACCAGGCGGATTCAGATAATGTTGCTGAGATCTTTACTTATGRTAAGGAGTTTACGACAGGTAACCTCTGGATACAAAGCAAAGACAATAGTTACTGCACTGCCAGGGTCTTTTCTGGATCCTTTGTTATCACCATCCCTCATGGAAGACTATGAACTGAGACAGTTAGTCTTGGAAGTGATGCATAATCTCATGGATCGCCATGACAATAGGGCAAAGCTTCGAGGGATCAGAATAATACCAGATGTGGCTGACCTAAAAATAAAAAGAGAAAAAATTTGTAGACAAGACGCAAGTTTCATGAAAAAGAATGGGCAACAACTATATCGGCACATATATTTGGGCTGTAAAGAGGAAGACAATGTTCAGAAAAACTATGAGCTACTTTATACTTCTCTTGCTCTTATAACTATTGAATTGGCCAATGAAGAAGTGGTTATTGATCTCATTCGATTAGCCATTGCTTTACAGGACAGTGCAATTATCAATGAGGATAATTTGCCAATGTTCCATCGTTGTGGAATCATGGCGCTGGTTGCTGCATACCTCAACTTTGTAAGTCAGATGATAGCTGTCCCTGCGTTTTGCCAGCATGTTAGCAAGGTTATTGAAATTCGAACTATGGAAGCCCCTTATTTTCTACCAGAGCATATTTTCAGAGATAAGTGCATGCTTCCAAAATCTTTAGAGAAGCATGACAAAAATTTGTACTTTTTGACCAACAAGATTGCAGAGTCACTAGGTGGCAGTGGCTATAGTGTTGAGAGATTGTCAGTACCGTACGTACCACAAGTAACAGATGAAGATCGACTTTCTAGAAGGAAAAGTATTGTGGACACCGTATCCATTCAGGTGGATATCCTGCCCAACAGCATTCCTTCGGATGATGTGGTTAGTAACACTGAAGAAATCACCTTTGAGGCGTTAAAGAAAGCAATTGATACCAGTGGAATGGAAGAACAGGAAAAGGAAAAGAGGCGTCTAGTAATAGAGAAATTCCAGAAAGCACCTTTTGAGGAAATAGCAGCACAGTGTGAATCCAAAGCAAATTTGCTTCATGATAGACTTGCTCAAATATTGGAACTCACCATACGCCCTCCTCCCAGTCCATCAGGAACACTGACCATTACTTCTGGGCACGCCCAATACCAGTCTGTCCCGGTCTACGAGATGAAGTTTCCAGATCTGTGTGTGTACTGA

Related Sequences

bmy_20615T0 SequenceType object (3)

Length: 888 aa      
>bmy_20615T0
PINIQQREFRGRVTVRIISVLGDFILFEQECVAAVLLCVLATSAWWTTSSLKTQKNLEHMITEDKVERRLWRNVNDRQGIYFMPFNLQADGLVKADMEKLTFYAVSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPFVESFLHMVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCDSDPETRTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRIGPPPSPSAADKEENPAVLAENCFRELLGRATFGNMNNAVRPVFAHLDHHRLWDPNEFAVHCFKIIMYSIQAQYSHHVIQEILGHLDARKKDSPRVRAGIIQVLLEAVAIAAKGSIGPTVLEVFNTLLKHLRLSVEFEANDLQGGSVSSANLNTSSKDNDEKIVQNAIIQTIGFFGSNLPDYQRSEIMMFIMGKVPVFGTSTHTLDISQLGDLGTRRIQIMLLRSLLMXRSLRQVTSGYKAKTIVTALPGSFLDPLLSPSLMEDYELRQLVLEVMHNLMDRHDNRAKLRGIRIIPDVADLKIKREKICRQDASFMKKNGQQLYRHIYLGCKEEDNVQKNYELLYTSLALITIELANEEVVIDLIRLAIALQDSAIINEDNLPMFHRCGIMALVAAYLNFVSQMIAVPAFCQHVSKVIEIRTMEAPYFLPEHIFRDKCMLPKSLEKHDKNLYFLTNKIAESLGGSGYSVERLSVPYVPQVTDEDRLSRRKSIVDTVSIQVDILPNSIPSDDVVSNTEEITFEALKKAIDTSGMEEQEKEKRRLVIEKFQKAPFEEIAAQCESKANLLHDRLAQILELTIRPPPSPSGTLTITSGHAQYQSVPVYEMKFPDLCVY*