Part of scaffold_2595 (Scaffold)

For more information consult the page for scaffold_2595 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HLA-DOB ENSTTRG00000004249 (Bottlenosed dolphin)

Gene Details

major histocompatibility complex, class II, DO beta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003990, Bottlenosed dolphin)

Protein Percentage 86.64%
cDNA percentage 89.31%
Ka/Ks Ratio 0.58924 (Ka = 0.1006, Ks = 0.1708)

BOLA-DOB ENSBTAG00000047707 (Cow)

Gene Details

HLA class II histocompatibility antigen, DO beta chain precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055511, Cow)

Protein Percentage 80.92%
cDNA percentage 84.1%
Ka/Ks Ratio 0.39915 (Ka = 0.137, Ks = 0.3433)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 816 bp    Location:231855..229814   Strand:-
>bmy_20619
ATGGATGTCTCTTTGCTAAGAGGAACCAGGGTGGGGCCCAGGGGAGCAGGGGCTACTTTGGCCGATTTACTAAGGTCAAAGTCCTCCTCTCCAATCAATGTGGTCTGGCATAATAAACCAGAAGATTTTGTGATTCAGGCAAAAGCTGACTGTTACTTCACCAATGGGACAGAAAATGTGCAGTTTGTGGTCAGATTCATCTTTAACCTGGAGGAGTATGCACGTTTTGACAGCAACTTAGGGATGTTTGTGGCCTTGACGGAGCTGGGCCAGCCTGACGCTGAGCTGTGGAACAATCGGCCCGATATACTGGCAAGGAGTAGAGCCTCTGTGGATGCGCTCTGCAGACACAACTACAAGCTGGGTGCACCCTTCACTGTGGGGAGAAAAGTGCAACCAGAGGTGACAGTGTATCCAGAGAGGATCCCAGCCTTGCAGCACCGCAATCTGCTGCTTTGCTCTGTGACAGGTTTCTACCCAGGGGACATCAAGATCACGTGGTTCCGGAATGGGCAGGAACAGAGAGAGGGGGTCATGTCCACTGGCCTCATTAGGAATGGAGACTGGACCTTTCAGACAATGGTGGTGCTGGCAATGACACCTGAACTTGGAGAGGTCTACACCTGCCTTGTTGATCATCCCAGCCTGCTGAGCCCTGTTTCTGTGGAGTGGAGAGCTCAGTCTGAATATTCTTGGAGAAAGATGCTGAGTGGAATTGCAGCCTTCCTGGTTGGGTTAGTCTTCCTTCTGGTGGGGATCGTCATCCACACCAGGGCTCGGAAAGGACGTGTGGAGACTCTGTTGTCTGGTGCTGAG

Related Sequences

bmy_20619T0 Protein

Length: 272 aa      View alignments
>bmy_20619T0
MDVSLLRGTRVGPRGAGATLADLLRSKSSSPINVVWHNKPEDFVIQAKADCYFTNGTENVQFVVRFIFNLEEYARFDSNLGMFVALTELGQPDAELWNNRPDILARSRASVDALCRHNYKLGAPFTVGRKVQPEVTVYPERIPALQHRNLLLCSVTGFYPGDIKITWFRNGQEQREGVMSTGLIRNGDWTFQTMVVLAMTPELGEVYTCLVDHPSLLSPVSVEWRAQSEYSWRKMLSGIAAFLVGLVFLLVGIVIHTRARKGRVETLLSGAE