Sequence details bmy_20628 (Coding sequence)

Part of scaffold_2566 (Scaffold)

For more information consult the page for scaffold_2566 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AFP ENSTTRG00000006583 (Bottlenosed dolphin)

Gene Details

alpha-fetoprotein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006228, Bottlenosed dolphin)

Protein Percentage 95.69%
cDNA percentage 96.19%
Ka/Ks Ratio 0.28533 (Ka = 0.0244, Ks = 0.0854)

AFP ENSBTAG00000017131 (Cow)

Gene Details

Alpha-fetoprotein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022772, Cow)

Protein Percentage 87.72%
cDNA percentage 89.8%
Ka/Ks Ratio 0.30123 (Ka = 0.0702, Ks = 0.233)

Additional orthologs identified in other species via the OPTIC pipeline.

AFP (Human)   Afp (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1395 bp    Location:206027..221946   Strand:+
Raw sequence 
>bmy_20628
ATGTTTGGTGTGGCACCTGCTGAGCTCCTGCCCTACGAGATTAGATACGTCTATGAGATAGCAAGAAGGCACCCYTTCCTATATGCACCTACAATTCTTTCTTTGGCTGCACAGTATGACAAAMTAATTCCACCTTGCTGCAAAGCCGAAAATGCAGTTGAATGCTTCCAAACAAAGGCAGCATCAATTACAAAAGAATTAAGAGAAAGCAGCTTGTTAAATCAACACATATGTGCAGTAATGAGAAAGTTTGGACCCCGAACCTTCCGAGCCATAACTGTTACTAAACTGAGTCAAAAGTTTCCCAAAGCGAATTTTACTGAAATTCAGAAACTGGTCGTGGATGTGGCCCACGTACACGAGGAATGCTGCAGAGGAAACGTGTTGGAGTGTCTGCAGGATGGGGAAAAAATTATGTCCTACATATGTTCTCAGCAAGATATTCTGTCAAGCAAAATAGCAGAATGCTGCAAATTACCCACCACACTTGAACTTGGTCATTGCATAATTCATGCAGAAAATGATGACAAACCTGAAGGCTTATCTCCAACTCTAAATAGGTTTTTAGGAGAGACAGATTTCAACCAACTTTCTTCAAGGGAAAAAGATCTCTACATGGCAAGATTTACTTATGAATATTCAAGAAGACATACTAAGCTTGCTGTCCCAATAATTCTAAGAGTTGCTAAAGGATATCAGGAGTTATTGGAGAAATGTTCCCAGTCTGAAAACCCTCCTGAATGCCAGGATAAAGGGGAAGAAGAGTTAGAGAAATATATCCAGGAGAGCCAAGCGCTGGCAAAGCGAAGCTGCGGCCTCTTCCAGAAATTAGGAGAATATTACTTACAAAATGCGTTTCTTGTTGCTTACACAAAGAAGGCCCCTCAGCTGACTCCAGCTGAGCTGATGACCTTGACCAGGAAAATGGCAACCACGGGAGCCACTTGTTGCCATCTCAGTGAGGACAAACAATTGGCCTGCGGTGAGGGAGCGGCTGACCTTATTATTGGACTGTTATGCATCAGACATGAAGAGACTCCTGTAAACCCTGGCGTTGGCCAGTGCTGCACCTCTTCATACGCCAACAGGAGGCCATGTTTCAGCAGCTTGGTGGTGGATGAGACATACGTTTCTCCGCCATTCTCTGATGACAAGTTCATCTTCCATAAGGATCTGTGCCAAGCTCAGGGTGTAGCACTGCAAACAATGAAGCAACAGTTTCTCATTAACCTTGTGAAGCAAAAGCCACAAATCACAGAGGAACAACTTGAGGCTGTCATTGCAGATTTCTCTGGCCTCCTGGAAAAGTGCTGCCAAGGCCAAGGGCAGGAAGTCTGCTTTGAGGAAGAGGGTCCAGCACTGATTTCAAAAACTCGTGCTGCTTTGGGAGTTTAA

Related Sequences

bmy_20628T0 Protein

Length: 465 aa      View alignments
>bmy_20628T0
MFGVAPAELLPYEIRYVYEIARRHPFLYAPTILSLAAQYDKJIPPCCKAENAVECFQTKAASITKELRESSLLNQHICAVMRKFGPRTFRAITVTKLSQKFPKANFTEIQKLVVDVAHVHEECCRGNVLECLQDGEKIMSYICSQQDILSSKIAECCKLPTTLELGHCIIHAENDDKPEGLSPTLNRFLGETDFNQLSSREKDLYMARFTYEYSRRHTKLAVPIILRVAKGYQELLEKCSQSENPPECQDKGEEELEKYIQESQALAKRSCGLFQKLGEYYLQNAFLVAYTKKAPQLTPAELMTLTRKMATTGATCCHLSEDKQLACGEGAADLIIGLLCIRHEETPVNPGVGQCCTSSYANRRPCFSSLVVDETYVSPPFSDDKFIFHKDLCQAQGVALQTMKQQFLINLVKQKPQITEEQLEAVIADFSGLLEKCCQGQGQEVCFEEEGPALISKTRAALGV*