Part of scaffold_2560 (Scaffold)

For more information consult the page for scaffold_2560 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPV6 ENSTTRG00000007798 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily V, member 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007382, Bottlenosed dolphin)

Protein Percentage 74.15%
cDNA percentage 76.51%
Ka/Ks Ratio 0.29248 (Ka = 0.0804, Ks = 0.2748)

TRPV6 ENSBTAG00000024219 (Cow)

Gene Details

transient receptor potential cation channel subfamily V member 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000033351, Cow)

Protein Percentage 83.71%
cDNA percentage 86.7%
Ka/Ks Ratio 0.20965 (Ka = 0.0939, Ks = 0.448)

TRPV6  (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily V, member 6

External Links

Gene match (Identifier: BACU019362, Minke Whale)

Protein Percentage 82.56%
cDNA percentage 86.12%
Ka/Ks Ratio 0.51475 (Ka = 0.1342, Ks = 0.2608)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2142 bp    Location:185214..192778   Strand:+
>bmy_20635
ATGGAAAAGGAGTTGCACAAAGGCTGTAGAGGATTTTTGAGTTTCTTCTCCTGGGTGTTTAAGGACCCATCAGACTTTTGTGAACTGTGGTTGCATTTGCCGTTTAGAGAGAGTATCTTGGCAGCATCCAGAAGAATGGATTGGGCTGCCAAAGAGAACGATATCCAGGCTCTCAGCAAGCTGCTCAAGTATGAAGCCTGCGATGTCCACCAGAAAGGAGCCCTGGGGGAGACGGCACTGCACGTGGCGGCCCTCTATGACAACCTGGAGGCCGCCATCGCGCTGATGGAGGCTGTCCCGGAGCTGGTCAACGAGCCCATTACCTCTGAGCTGTATGAAGGTCAGACGGCACTGCACATGGCCGTCATGAACCAGAACGTGAACTTGGTGAAAGCCCTGCTCGCCCATGGGGCCAACGTGTCTGCAAGAGTTACAGGCTCCAATTTCTGCCCCGGTCCCCACAATCTCATCTCCTTTGGGGAGCACCCTTTGTCCTTTGCGGCCTGCATGGGCAGCGAGGAGATCGTGAGGCTGCTCATTGAGCACGGCGCTGACATCCGGGCCCAGGACTCCCTGGGAAACACAGTGCTGCACATCCTCGTCCTGCAGCCCAACAAAACCTTTGCCTGCCAGATGTACAACCTGCTGCTGTCCTACGATGCGCGTGGGGACCACCTGCAGTCCCTGGATCTTGTGCCCAATCACCAGGGCCTCACCCCCTTCAAGCTGGCTGGAGTGGAGGGCAACACCATGATGTTCCAAAACCTGATGCAAAAACGGAAGTACATCCAGTGGACATACGGGCCGCTGACCTCCACTCTCTACGATCTCACGGAGATCGACTCCTCAGGGGAGGAGCAATCCCTGCTGGAGCTTGTCGTCACCTCCAAGAAGCGGGAGGCTCGCCAGATCCTGGACCAGACGCCAGTGAAGGAGCTGGTGAACCTCAAGTGGAAGAGATACGGGTGGCCATACTTCTGTATGCTGGCTGCCATATACCTGCTGTACATGGTCTGCTTTACCACGTGCTGTGTCTACCGCCCCCTCAATCCCAGGACCGACAAACAAACTGGCCCCCGGGACAACACCCTCCTACAGCAGAAGCTACTTCAGGAGGCCTACGTGACCCCCGAGGATCACCTCCGACTGGTGGGGGAGCTGGTGTCCGTCTTTGGAGCTGTGATCATTCTGCTCATAGAGATTCCAGACATCTTCCGCGTGGGGGTCACTCGCTTCTTTGGACAGACCATCCTTGGAGGACCGTTCCACGTCCTCTTCATCACCTATGCCTGCATGGTGCTGGTGACCATGGTGATGAGGCTCACCAACACCAACGGGGAGGTGGTGCCCATGTCCTTCGCCCTGGTGCTGGGCTGGTGCAACGTCATGTACTTTGCCCGAGGATTCCAGATGCTGGGCCCCTTCACCATGATTTTTGGCGATCTGATGAGATTCTGCTGGCTGATGGCTGTGGTCATCCTGGGCTTTGCCTCAGCCTTCTTTATCATCTTCCAGACACAGGACCCTAACGAGCTGGGCCATTTCTACAATTACCCCATGGCGCTGTTCAGCACCTTCGAGCTGTTCCTCACCATCATCGACGGCCCTGCCAACTACGACGTGGACCTGCCCTTCATGTACAGCATCACCTACGCTGCCTTCGCCGTCATCGCCGCTCTGCTCATGCTCAACCTCCTCATCGCTATGATGGGCGACACGCACTGGCGCGTAGCCCACGAGCGGGATGAGCTCTGGAGGGCCCAGGTCGTGGCCACCACAGTGATGCTGGAAAAGAAGCTGCCTCGCTGCCTGTGGCCTCGCTCCGGGATCTGCGGGCGCAAGTTCGGGCTGGGGGACCGTTGGTTCCTGCGGGTGGAAGACAGACAGGATCTCAACCGGCAGCGCGTCTGGCGCTAYGCGCAGGCCTTCTGCAACCCAGGCTCCGAAGATGACATGGAAGGACGGTGGCTGGGCGGCCCCTTCGGCCCCCACCTGTCCCTTCCTGCCCCCTCGGTGTCTCGAAGTACTTCCCGCAGCAGCATGAATTGGGGGAGGCTGCGGGAAGCGACCCGGAGGAGAGAGCGGAGGGGGACGGTGAACAGGGCTCTGGAGGACAGGGAGGGTTGGGAGTACCAGATCTGA

Related Sequences

bmy_20635T0 Protein

Length: 714 aa      View alignments
>bmy_20635T0
MEKELHKGCRGFLSFFSWVFKDPSDFCELWLHLPFRESILAASRRMDWAAKENDIQALSKLLKYEACDVHQKGALGETALHVAALYDNLEAAIALMEAVPELVNEPITSELYEGQTALHMAVMNQNVNLVKALLAHGANVSARVTGSNFCPGPHNLISFGEHPLSFAACMGSEEIVRLLIEHGADIRAQDSLGNTVLHILVLQPNKTFACQMYNLLLSYDARGDHLQSLDLVPNHQGLTPFKLAGVEGNTMMFQNLMQKRKYIQWTYGPLTSTLYDLTEIDSSGEEQSLLELVVTSKKREARQILDQTPVKELVNLKWKRYGWPYFCMLAAIYLLYMVCFTTCCVYRPLNPRTDKQTGPRDNTLLQQKLLQEAYVTPEDHLRLVGELVSVFGAVIILLIEIPDIFRVGVTRFFGQTILGGPFHVLFITYACMVLVTMVMRLTNTNGEVVPMSFALVLGWCNVMYFARGFQMLGPFTMIFGDLMRFCWLMAVVILGFASAFFIIFQTQDPNELGHFYNYPMALFSTFELFLTIIDGPANYDVDLPFMYSITYAAFAVIAALLMLNLLIAMMGDTHWRVAHERDELWRAQVVATTVMLEKKLPRCLWPRSGICGRKFGLGDRWFLRVEDRQDLNRQRVWRYAQAFCNPGSEDDMEGRWLGGPFGPHLSLPAPSVSRSTSRSSMNWGRLREATRRRERRGTVNRALEDREGWEYQI*