Part of scaffold_2589 (Scaffold)

For more information consult the page for scaffold_2589 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1QTNF3 ENSTTRG00000021360 (Bottlenosed dolphin)

Gene Details

C1q and tumor necrosis factor related protein 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016550, Bottlenosed dolphin)

Protein Percentage 79.9%
cDNA percentage 80.56%
Ka/Ks Ratio 0.28308 (Ka = 0.0229, Ks = 0.0809)

C1QTNF3 ENSBTAG00000017071 (Cow)

Gene Details

complement C1q tumor necrosis factor-related protein 3 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022698, Cow)

Protein Percentage 95.59%
cDNA percentage 92.81%
Ka/Ks Ratio 0.08508 (Ka = 0.0227, Ks = 0.267)

C1QTNF3  (Minke Whale)

Gene Details

C1q and tumor necrosis factor related protein 3

External Links

Gene match (Identifier: BACU015029, Minke Whale)

Protein Percentage 97.06%
cDNA percentage 97.06%
Ka/Ks Ratio 0.21563 (Ka = 0.0161, Ks = 0.0747)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 615 bp    Location:157023..180446   Strand:+
>bmy_20691
ATGCTCGGAAGGCAGCTCGTCTGTTGGCACCTGCTGGCTTTGCTTTTCCTCCCTTTTTGCCTGTGTCAAGATGAATACATGGAGTCTCCACAAACTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGTCATGGAGACTACAGCTTTCGAGGCTACCAAGGCCCCCCTGGACCTCCTGGTCTCCCTGGCATTCCAGGTAAGGATGAGAGAGATGCGTTGTTTCCAATTGCATTCATGGCTTCTCTGGCAACTCACTTCAGCAATCAGAACAGTGGTATTATCTTCAGCAGTGTCGAAACCAACATCGGAAATTTCTTCGATGTCATGACCGGTAGATTTGGGGCCCCAGTATCAGGCGTGTATTTCTTCACCTTCAGCATGATGAAGCATGAGGACGTTGAGGAAGTGTATGTGTACCTCATGCACAATGGCAACACGGTCTTCAGCATGTACAGTTATGAAACAAAGGGGAAATCAGATACATCCAGCAACCATGCAGTGCTGAAGCTGGCCAAAGGGGATGAGGTTTGGCTGAGAATGGGCAATGGMGCTCTTCACGGGGACCACCAGCGCTTCTCCACCTTTGCAGGCTTCCTGCTCTTTGAAACTAAGTAA

Related Sequences

bmy_20691T0 Protein

Length: 205 aa      View alignments
>bmy_20691T0
MLGRQLVCWHLLALLFLPFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGLPGIPGKDERDALFPIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYETKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK*