Part of scaffold_2589 (SequenceType object (1))

For more information consult the page for scaffold_2589 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C1QTNF3ENSTTRG00000021360 (Bottlenosed dolphin)

Gene Details

C1q and tumor necrosis factor related protein 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016550, Bottlenosed dolphin)

Protein Percentage 79.9%
cDNA percentage 80.56%
Ka/Ks Ratio 0.28308 (Ka = 0.0229, Ks = 0.0809)

C1QTNF3ENSBTAG00000017071 (Cow)

Gene Details

complement C1q tumor necrosis factor-related protein 3 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022698, Cow)

Protein Percentage 95.59%
cDNA percentage 92.81%
Ka/Ks Ratio 0.08508 (Ka = 0.0227, Ks = 0.267)

C1QTNF3 (Minke Whale)

Gene Details

C1q and tumor necrosis factor related protein 3

External Links

Gene match (Identifier: BACU015029, Minke Whale)

Protein Percentage 97.06%
cDNA percentage 97.06%
Ka/Ks Ratio 0.21563 (Ka = 0.0161, Ks = 0.0747)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 615 bp    Location:157023..180446   Strand:+
>bmy_20691
ATGCTCGGAAGGCAGCTCGTCTGTTGGCACCTGCTGGCTTTGCTTTTCCTCCCTTTTTGCCTGTGTCAAGATGAATACATGGAGTCTCCACAAACTGGAGGACTGCCCCCAGACTGCAGCAAGTGTTGTCATGGAGACTACAGCTTTCGAGGCTACCAAGGCCCCCCTGGACCTCCTGGTCTCCCTGGCATTCCAGGTAAGGATGAGAGAGATGCGTTGTTTCCAATTGCATTCATGGCTTCTCTGGCAACTCACTTCAGCAATCAGAACAGTGGTATTATCTTCAGCAGTGTCGAAACCAACATCGGAAATTTCTTCGATGTCATGACCGGTAGATTTGGGGCCCCAGTATCAGGCGTGTATTTCTTCACCTTCAGCATGATGAAGCATGAGGACGTTGAGGAAGTGTATGTGTACCTCATGCACAATGGCAACACGGTCTTCAGCATGTACAGTTATGAAACAAAGGGGAAATCAGATACATCCAGCAACCATGCAGTGCTGAAGCTGGCCAAAGGGGATGAGGTTTGGCTGAGAATGGGCAATGGMGCTCTTCACGGGGACCACCAGCGCTTCTCCACCTTTGCAGGCTTCCTGCTCTTTGAAACTAAGTAA

Related Sequences

bmy_20691T0 SequenceType object (3)

Length: 205 aa      View alignments
>bmy_20691T0
MLGRQLVCWHLLALLFLPFCLCQDEYMESPQTGGLPPDCSKCCHGDYSFRGYQGPPGPPGLPGIPGKDERDALFPIAFMASLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYETKGKSDTSSNHAVLKLAKGDEVWLRMGNGALHGDHQRFSTFAGFLLFETK*