Part of scaffold_2606 (Scaffold)

For more information consult the page for scaffold_2606 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCO1 ENSTTRG00000000068 (Bottlenosed dolphin)

Gene Details

SCO1 cytochrome c oxidase assembly protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000063, Bottlenosed dolphin)

Protein Percentage 98.88%
cDNA percentage 98.7%
Ka/Ks Ratio 0.20906 (Ka = 0.0054, Ks = 0.0259)

SCO1 ENSBTAG00000021780 (Cow)

Gene Details

Protein SCO1 homolog, mitochondrial

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029032, Cow)

Protein Percentage 89.42%
cDNA percentage 91.36%
Ka/Ks Ratio 0.32448 (Ka = 0.0595, Ks = 0.1835)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 825 bp    Location:222739..237341   Strand:+
>bmy_20700
ATGGCGGGGTTGTTGCGCGCGCCCGGCAGGATAATGCGGCTTCCAGGTGGCAAACTTTGGTCTCTCTTGCCTCGCGGCCTCGGGGTTTGGGGACCCGGGGAGGGGACCGCGAAGGTCATGCTGGGGCGGCTCCGCGCGCCGCCAGAGGAGGCGTGGCGGGCCTCGGGGCTCGCTGGCAGCTGCCTGCGGTGCCGGCTCCTCAGCACGGCGAGGCCGCCCCCGCCCGGGTCGTCAGGACCGGAGCCGGAGGGCGGCGGAGACCCCACGCGSCCCTCGCAGCCCCGGCCTGTTTCCTGGAAGTCCTTAGCCATCACATTTGCTATTGGAGGAGTTTTACTGGCTGGGATGAAGTACTTCAAGAAAGAAAAGACAGAGAAGCTGGAGAAGGAACGGCAGCGAAGCATCGGAAAGCCTTTACTTGGGGGCCCATTTTCCCTCACAACTCATACTGGCGAGCCCAAAACKGATAAGGACTACCTGGGTCAATGGGTATTGATTTATTTTGGTTTCACTCATTGCCCTGATATCTGTCCAGAAGAACTGGAAAAAATGATTCAAGTTGTGGATGAAATAGAATTTTCTCCCAAACTGATTGGCTTAACTGGCACAAAAGAAGAGATCGATCAAATGGCCAGAGCATTCAGAGTGTATTACAGCCCTGGCCCCAAGGACGAAGATGAGGACTACATAGTGGATCATACAATCATAATGTACTTGATTGGACCAGATGGTGAGTTTCTAGATTATTTTGGCCAGAACAAGAAGAATGCAGAAATAGCTGGTTCGATTGCTGCGCACATGAGGGAACACAGGAAAAAGAGCTAG

Related Sequences

bmy_20700T0 Protein

Length: 275 aa      View alignments
>bmy_20700T0
MAGLLRAPGRIMRLPGGKLWSLLPRGLGVWGPGEGTAKVMLGRLRAPPEEAWRASGLAGSCLRCRLLSTARPPPPGSSGPEPEGGGDPTRPSQPRPVSWKSLAITFAIGGVLLAGMKYFKKEKTEKLEKERQRSIGKPLLGGPFSLTTHTGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIQVVDEIEFSPKLIGLTGTKEEIDQMARAFRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKKNAEIAGSIAAHMREHRKKS*