Part of scaffold_2600 (Scaffold)

For more information consult the page for scaffold_2600 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NLRP3 ENSTTRG00000013577 (Bottlenosed dolphin)

Gene Details

NLR family, pyrin domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012884, Bottlenosed dolphin)

Protein Percentage 98.02%
cDNA percentage 97.67%
Ka/Ks Ratio 0.14859 (Ka = 0.0093, Ks = 0.0626)

NLRP3 ENSBTAG00000001273 (Cow)

Gene Details

NACHT, LRR and PYD domains-containing protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001675, Cow)

Protein Percentage 94.02%
cDNA percentage 92.93%
Ka/Ks Ratio 0.14914 (Ka = 0.0312, Ks = 0.2094)

NLRP3  (Minke Whale)

Gene Details

NLR family, pyrin domain containing 3

External Links

Gene match (Identifier: BACU004881, Minke Whale)

Protein Percentage 92.19%
cDNA percentage 92.81%
Ka/Ks Ratio 0.27737 (Ka = 0.05, Ks = 0.1802)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2580 bp    Location:142343..128102   Strand:-
>bmy_20704
ATGAGCATGGCAAGTGTCCGCTGCAAGCTGGCTCGTTACCTGGAGGATCTGGAAGACGTAGACTTTAAGAAATTCAAGATGCACTTAGAAGACTATCCTAGTCAGAAGGGCTGCACGTCACTTCCTCGGGGTCAGACAGAGAAAGCAGATCACGTGGATCTAGCCACTCTGATGATTGATTTCAATGGAGAGGAGAAAGCATGGGCCATGGCCAACCAGGAAGAAAGCCTTGAAGAGGAGTGGATGGGTTTACTGGGGTACCTTTCCAGAATCTCTATTTGTAAAAAAAAGAAAGATTACTGTAAGAAGTATAGAAAATATGTGAGAAGCAGATTCCAGTGTATCAAAGACAGGAATGCCCGTCTGGGTGAGAGCGTGAACCTCAACAAACGCTTCACCAGGCTGCGTCTCATCAAGGAACACCGGAGCCAGCAGGAGAGAGAGCATGAGCTCCTGGCCATTGGTAGGACCTCAGCCAAGATGCAGGATAGCCCCGTGAGTTCCATGAACTTGGAATTGCTTTTTGATCCTGAGGACCAACACTCTGAGCCTGTGCACACGGTGGTATTCCAGGGAGCAGCGGGCATTGGGAAGACAATACTGGCCAGGAAGATCATGTTGGACTGGGCGTCAGGGGAACTTTACCAGGACAAATTTGACTATTTGTTTTACATTCACTGTCGGGAGGTGAGCCTTGGGATGCAGAGGAGCCTGGGGGACCTGATCGCCAGCTGCTGCCCTGGCCCAAACCCACCCATAGGCAAGATTGTGAGCAAGCCTTCCAGGATCCTCTTCCTCATGGATGGTTTTGATGAGCTGCAAGGTGCCTTTGATGAGCACACAGAAGCACTCTGCACCAACTGGCAGAAGGTGGAGCGGGGAGACATTCTCCTGAGCAGCCTCATAAGGAAAAGACTGCTTCCCGAGGCCTCTCTGCTCATCACCACAAGACCCGTGGCCCTGGAGAAACTTCAGCACTTGCTGGGCCGGGCTCGTCATGTGGAGATCCTGGGTTTCTCAGAGGTCAGAAAGAAGGAATATTTCTTTAAGTATTTCTCAGATGAACAGCAAGCCAGGGAAGCCTTCAGGCTGATTCAGGAGAATGAGATCCTCTTCACCATGTGCTTTATTCCCCTGGTCTGCTGGATCGTGTGCACTGGGCTGAAACAGCAGATGGACAGTGGCAAGAGCCTTGCCCGGACATCCAAGACCACCACTGCYGTGTATATCTTCTTCCTCTCCAGTTTGTTGCAGTCCCAAGGAGGGAGCCAGGAGCACCACAACTCTGCCACCCTCTGGGGTCTCTGTTCATTGGCTGCAGATGGAATCTGGAACCAAAAAATCCTGTTTGAGGAGTGTGACCTCAGGAATCATGGCCTGCAGAAGGCAGATGTGTCTGCTTTCTTGAGGATGAACCTATTCCAAAAGGAAGTGGACTGTGAGAAATTCTACAGCTTCATCCACATGACGTTCCAGGAGTTCTTTGCTGCCATGTACTATCTGCTGGAAGAGGAGAATCAGGGGGAGATGAGCAACACGCAGCAGAGTAGTCTGAAGCTTCCCAACCGAGATGTGACGGTCCTTCTCGAAAACTATGGCAAGTTTGAAAAAGGGTATCTGATTTTCGTTGTCCGTTTTCTCTTTGGTCTTATAAACCAGGAGAGAACCTCCTACTTGGAGAAAAAACTGAGTTGCAAGATCTCTCAGAAAATCAGGCTGGAGTTGCTAAAATGGATTGAAGCAAAAGCCGAGGCCAAGATGCTACAGATTGAGCCCAGCCAGCTGGAATTGTTCTACTGTTTGTATGAGATGCAGGAGGAGGACTTTGTGCAAAGGGCCATGGGCTATTTCCCCAAAATTGAGATCAAGCTCTCCACCAGAATGGACCATGTGGTTTCTTCTTTTTGTATTGAGAACTGTCGCCACGTGGAATCACTTTCCCTAAGATTGCTCCATAACTCATCCAAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGAAAGAGGAGGAAGTTCAACACTCTGATGTGAACCATTGTGTCCTCTCTGATCCTCATGTTGCATATTCTCAGCGATTGGTGAACTATCTCACTTCCAGCATTTGCAGGGGCATCTTCTCAGTCCTGAGCAATAACTGGAACCTCACTGAATTGAACCTCAGTGGCAATAGCCTGGGAGACCCAGGGATGAAGGTATTATGTGAAACACTCCATCAACCTGGATGTAACATTCGCAGATTGTGGTTGGGGCAGTGTTGCCTTTCCCATCAGTGCTGCTTCAACATCTCCTCGGTCTTGAGTAACAATCAGAAGCTGGTGGAACTGGATCTGAGCCACAATGCCCTGGGAGACTTTGGAATCAGACTTTTGTGTGTGGGACTTAGGCATCTATTTTGCAATCTGAAGAAGCTCTGGTTGGTCAGTTGCTGTCTCACATCGGTGTGTTGTGATGATCTCGCATCCGTCCTGAGCACCAACCATTCCCTGACCAGACTCTACTTGGGGGAAAATGCTCTGGGAGACTCAGGAGTTGGAATTTTATGTGAAAAAGCAAAGAATCCACAATGTAACCTGCAGAAACTG

Related Sequences

bmy_20704T0 Protein

Length: 860 aa      View alignments
>bmy_20704T0
MSMASVRCKLARYLEDLEDVDFKKFKMHLEDYPSQKGCTSLPRGQTEKADHVDLATLMIDFNGEEKAWAMANQEESLEEEWMGLLGYLSRISICKKKKDYCKKYRKYVRSRFQCIKDRNARLGESVNLNKRFTRLRLIKEHRSQQEREHELLAIGRTSAKMQDSPVSSMNLELLFDPEDQHSEPVHTVVFQGAAGIGKTILARKIMLDWASGELYQDKFDYLFYIHCREVSLGMQRSLGDLIASCCPGPNPPIGKIVSKPSRILFLMDGFDELQGAFDEHTEALCTNWQKVERGDILLSSLIRKRLLPEASLLITTRPVALEKLQHLLGRARHVEILGFSEVRKKEYFFKYFSDEQQAREAFRLIQENEILFTMCFIPLVCWIVCTGLKQQMDSGKSLARTSKTTTAVYIFFLSSLLQSQGGSQEHHNSATLWGLCSLAADGIWNQKILFEECDLRNHGLQKADVSAFLRMNLFQKEVDCEKFYSFIHMTFQEFFAAMYYLLEEENQGEMSNTQQSSLKLPNRDVTVLLENYGKFEKGYLIFVVRFLFGLINQERTSYLEKKLSCKISQKIRLELLKWIEAKAEAKMLQIEPSQLELFYCLYEMQEEDFVQRAMGYFPKIEIKLSTRMDHVVSSFCIENCRHVESLSLRLLHNSSKEEEEEEEEEEKEEEVQHSDVNHCVLSDPHVAYSQRLVNYLTSSICRGIFSVLSNNWNLTELNLSGNSLGDPGMKVLCETLHQPGCNIRRLWLGQCCLSHQCCFNISSVLSNNQKLVELDLSHNALGDFGIRLLCVGLRHLFCNLKKLWLVSCCLTSVCCDDLASVLSTNHSLTRLYLGENALGDSGVGILCEKAKNPQCNLQKL