Sequence detailsbmy_20720 (Coding sequence)

Part of scaffold_2613 (SequenceType object (1))

For more information consult the page for scaffold_2613 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYCE1ENSTTRG00000015860 (Bottlenosed dolphin)

Gene Details

synaptonemal complex central element protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015028, Bottlenosed dolphin)

Protein Percentage 86.01%
cDNA percentage 90.33%
Ka/Ks Ratio 0.62062 (Ka = 0.0959, Ks = 0.1546)

SYCE1ENSBTAG00000035072 (Cow)

Gene Details

Synaptonemal complex central element protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000046422, Cow)

Protein Percentage 86.56%
cDNA percentage 89.25%
Ka/Ks Ratio 0.28992 (Ka = 0.08, Ks = 0.276)

Additional orthologs identified in other species via the OPTIC pipeline.

SYCE1 (Human)   Syce1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 582 bp    Location:235743..226939   Strand:-
Raw sequence 
>bmy_20720
ATGGCGGGGCGCTCGGGGTCTTCGAACGCGGAGCAGGCGGGAGCCGTGGGCCGGGCTGACGAGGCCGGAGGGCAGGCCAAGTCCTCACAGAAAATTGAAGACTTGATGGAAATGAAGCCAGAGCAGCTGGCCCTGGAGATTGGCGCCCTGGACAGCAGCAAGGAGCAGCTGCTCAAGGAAGAAAAGCTGGTGGAGGCAAAGCTGGAGGATGTGAAGCATCGTCTGTGCTCCCAGTTTGGAGCCAAGGGCTGCTCAGCAATCACTGAGGGGCTCTTCCTGCGCAGCGAGGAAGCAGCAGCTGTGGTGCATCTGTTTGAGGAGGAGAACGAGAAGGCCCAGGAGTTCCTGGAGGCTGCTGCCAGGCGCCAGGAGCAGCTGCAGCAGAAGTGCCAGCAGCTGCAGCAGAAGAGGCAGAGGCTGAAGGAGGAGCTGGAAAAGCTTGGAGTGCAGGTCCCTGCTCAAGGCCAGAGCAAGCAAGAGGAAGGGGCTGGCCCAGGAGAAGCTGCCAATCCCAAGCCCCTTCGAGTCAGTGAGGAGAAAGACCCAGAGCCGCCCACTAAGCAGAGCCTGATGCCCTCCTAG

Related Sequences

bmy_20720T0 SequenceType object (3)

Length: 194 aa      View alignments
>bmy_20720T0
MAGRSGSSNAEQAGAVGRADEAGGQAKSSQKIEDLMEMKPEQLALEIGALDSSKEQLLKEEKLVEAKLEDVKHRLCSQFGAKGCSAITEGLFLRSEEAAAVVHLFEEENEKAQEFLEAAARRQEQLQQKCQQLQQKRQRLKEELEKLGVQVPAQGQSKQEEGAGPGEAANPKPLRVSEEKDPEPPTKQSLMPS*