Part of scaffold_2632 (Scaffold)

For more information consult the page for scaffold_2632 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS41 ENSTTRG00000004214 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 41 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003999, Bottlenosed dolphin)

Protein Percentage 81.83%
cDNA percentage 83.78%
Ka/Ks Ratio 0.48181 (Ka = 0.1541, Ks = 0.3199)

VPS41 ENSBTAG00000007305 (Cow)

Gene Details

vacuolar protein sorting-associated protein 41 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009615, Cow)

Protein Percentage 81.08%
cDNA percentage 81.33%
Ka/Ks Ratio 0.31912 (Ka = 0.1568, Ks = 0.4915)

VPS41  (Minke Whale)

Gene Details

vacuolar protein sorting 41 homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU012620, Minke Whale)

Protein Percentage 78.5%
cDNA percentage 82.11%
Ka/Ks Ratio 0.58693 (Ka = 0.1842, Ks = 0.3138)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2001 bp    Location:86813..2465   Strand:-
>bmy_20737
ATGTCAGTCAGCAAACGAGCTGTGTCTCCAAGCAACAGCAGGAGTGGCTATTCAGGTGTGACTCTGCCGGTGCTGATCAAGGCCCCTGTGTCCCTGCCTGAGATTTTCCCTGTGACTCCCCTCACCTCCAGCCGCCACTGCACCGAGTGTCATTCTGCTATACACTTGACCGAGTTGCTGCTGTTTGAGCGGTCTTGGATGAGCAGGTGGAAGTCTTCAGTTCTGCACGAAGGAGAAGGGAACATAAGGAGTGTGAAGTGGAGGGGCCATCTGATTGCCTGGGCCAATAATATGATATGCTCGGTGAAGGAACGGCATGCCAGTGAAATGAGGGACTTGCCGAGCCGATACGTTGAAATAGGCCGCACTGGGGAAGCTTCTCCAGAACCTTCTGTGCCTGGCTACATGCTGCACGTGCTCGTCTCTGAACACGTGGTTGTGGGAAGTTCTCTACGCATGTGCTTCGTGAGAATATTGATCACGTCACCACTTTACCAAAAATTATTTCCAAGTGCCTGGATAAGAATATTCAGTTCAGGTTCAGCGGTGTCTCAGTTTGAAACTGAATTCTACATCAGTGGACTGGCACCTCTCTGTGATCAGCTTGTTGTACTTTCCTATGTAAAGGAGGTTTCCGAAAAAACGGAAGCTCTGATGGCAGCTGAAATTAGCCAAAAGAACATTAAAAGACATAAGATTCTGGACATCGGCTTGGCATATATAAACCACCTAGTGGAGAAAGGAGAGTACGACATAGCGGCACGCAAATGCCAGAAAATTCTTGGGAAAAATGCAGCACTCTGGGAATATGAAGTTTATAAATTTAAAGAAATTGGACAGCTTAAGGCTATTAGTCCTTATTTGCCAAGAGGGGATCCAGTTCTGAAACCACTCATCTATGAAATGATCTTGCATGAATTTTTGGAAAGTGATTATGAGGGTTTTGCCACACTGATCCGAGAATGGCCGGGAGATCTGTACAACAATTCAGTAATAGTTCAAGCAGTTCGGGATCATCTGAAGAAAGACAGTCAGAACAGAACGTTACTTAAAACCCTGGCAGAATTGTACACCTATGACAAAAACTATGGCAATGCTCTGGAAATATACTTAACGTTAAGACATAAGGATAAAGCTGTTGACATGCTTCTGGACAACGAAGATAAAATTTCAATTAAAAAGGTAGTGGAAGAATTAGAAGACAGACCAGAGTTGCAGCACGTGTATCTGCATAAGCTTTTCAAAAGAGACCATCATAAGGGGCAGCGCTACCACGAGAAGCAGATCAGCCTTTATGCTGAATTCGACCGACCCAACTTGCTTCCATTTCTCCGAGACAGTATCCACTGCCCCCTTGAAAAGGCTCTTGAGATCTGTCAACAGAGAAACTTTGTAGAAGAGACAGTTTATCTTCTGAGCCGAATGGGTAATAGCCGAAGTGCCCTGAAGATGATCATGGAGGAATTACATGACGTTGATAAAGCGATTGAATTTGCCAAGGAGCAGGATGACGGTGAACTCTGGGAAGATCTGATTTTATATTCCATCGACAAACCACCCTTTATCACCGGCTTGTTAAACAATATCGGCACGCACGTTGACCCAATTCTACTGATTCACCGCATTAAGGAAGGAATGGAGATTCCTAATTTGAGAGACTCCTTGGTTAAAATTCTGCAAGACTACAATCTGCAAATTCTGCTTCGCGAAGGCTGCAAGAAGATTCTCGTAGCTGACTCTTTGTCCTTACTAAAGAAGATGCACCGAACTCAAATGAAAGGCATTCTGGTTGATGAGGAGAACATCTGTGAGTCCTGTCTTTCCCCTGTTCTTCCATCAGACGCAGCTAAGCCCTTCAGCGCGGTGGTCTTCCACTGCCGCCATATGTTCCACAAGGAGTGCCTGCCTATGACCAGCATGAACTCTCCTGTGCAGTTCTGTAACATCTGCAGTGCTAAGCACCGGGGACCAGGAAGTGCCATTTTGGAGATGAAGAAATAG

Related Sequences

bmy_20737T0 Protein

Length: 667 aa      View alignments
>bmy_20737T0
MSVSKRAVSPSNSRSGYSGVTLPVLIKAPVSLPEIFPVTPLTSSRHCTECHSAIHLTELLLFERSWMSRWKSSVLHEGEGNIRSVKWRGHLIAWANNMICSVKERHASEMRDLPSRYVEIGRTGEASPEPSVPGYMLHVLVSEHVVVGSSLRMCFVRILITSPLYQKLFPSAWIRIFSSGSAVSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEALMAAEISQKNIKRHKILDIGLAYINHLVEKGEYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKTLAELYTYDKNYGNALEIYLTLRHKDKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEFDRPNLLPFLRDSIHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQMKGILVDEENICESCLSPVLPSDAAKPFSAVVFHCRHMFHKECLPMTSMNSPVQFCNICSAKHRGPGSAILEMKK*