Part of scaffold_2623 (Scaffold)

For more information consult the page for scaffold_2623 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIFO ENSTTRG00000007847 (Bottlenosed dolphin)

Gene Details

primary cilia formation

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007417, Bottlenosed dolphin)

Protein Percentage 87.5%
cDNA percentage 92.36%
Ka/Ks Ratio 0.67977 (Ka = 0.0725, Ks = 0.1067)

BT.50400 ENSBTAG00000002489 (Cow)

Gene Details

protein pitchfork

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010125, Cow)

Protein Percentage 81.25%
cDNA percentage 89.58%
Ka/Ks Ratio 0.7081 (Ka = 0.1029, Ks = 0.1452)

PIFO  (Minke Whale)

Gene Details

primary cilia formation

External Links

Gene match (Identifier: BACU019369, Minke Whale)

Protein Percentage 96.88%
cDNA percentage 98.26%
Ka/Ks Ratio 0.47625 (Ka = 0.014, Ks = 0.0293)

Genome Location

Sequence Coding sequence

Length: 831 bp    Location:141263..134904   Strand:-
>bmy_20748
ATGCTTACACTTGCAGAACTTGCTGACAATGAGTGTCTAATTCTCATCCAGCTCCCACAATTCAACAGCGCCTGTTGGAAGTGGGGAAGAGGAGTCTCCATTGCTGAGCCTGACATTCAAAACAAAGAAAGCAAAATGGGAAGAAACGGAAAGATACAGGCAACGCAATACACAAACGCTGACCCTAGTGACACTGGCACAATGTGCTTCAACAAAGCAGAGACGCTGGTTAACTACTCGTTTGGAACATGTCAACAGAGGAAGCTCTTTCCTCACTTCCACCCCCCAAACTTGTTGGGGAACAAGTTTCTCCCTCTTAGGGGAGTGCCCCACAGAGGGCCTGGATGTTACATAGGAGAAGATGTGAGTATTCACTTTCCTTTAAGTAGGTCTCAGTTCCCAGACTATCTAAGGAGGTATGGCTTGGCATACAACCTCTCTAAGATCCCGACCAGTATAAAAGGATATGCTTTTGGAGCCAGAACAGCTGTGAGGTTTAAGCCAATCAGCAAGGATATGACACCTTACCCAGGCATGTACCAAACAGTCGGTCCTCAGGAGCAAACACACAAACAAAATTTTGCTCCATTTAATGCCTTGTTGCCTCGATTTAGGACATACTCTAAGGACACTTGTTATCCTGGCCCTGGCACATATAACCCAGAAATAAAGGCACCCAAAAAAATCATCTGGCCAATGAAATTTGGATCTCCAGACTGGGCCCAGGTTCCATGTCTACAGAAAAGAACCCTGAAATCTGAGCTATCCACAGACAAAGACTTTAGAAAGCATCGGAACCGTGTGGCCTACCTAAGCCTGTATTACAACTGA

Related Sequences

bmy_20748T0 Protein

Length: 277 aa      View alignments
>bmy_20748T0
MLTLAELADNECLILIQLPQFNSACWKWGRGVSIAEPDIQNKESKMGRNGKIQATQYTNADPSDTGTMCFNKAETLVNYSFGTCQQRKLFPHFHPPNLLGNKFLPLRGVPHRGPGCYIGEDVSIHFPLSRSQFPDYLRRYGLAYNLSKIPTSIKGYAFGARTAVRFKPISKDMTPYPGMYQTVGPQEQTHKQNFAPFNALLPRFRTYSKDTCYPGPGTYNPEIKAPKKIIWPMKFGSPDWAQVPCLQKRTLKSELSTDKDFRKHRNRVAYLSLYYN*