Part of scaffold_2602 (Scaffold)

For more information consult the page for scaffold_2602 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NCBP1 ENSTTRG00000000507 (Bottlenosed dolphin)

Gene Details

nuclear cap binding protein subunit 1, 80kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000475, Bottlenosed dolphin)

Protein Percentage 86.72%
cDNA percentage 86.37%
Ka/Ks Ratio 0.10177 (Ka = 0.003, Ks = 0.0297)

NCBP1 ENSBTAG00000009732 (Cow)

Gene Details

nuclear cap binding protein subunit 1, 80kDa

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053621, Cow)

Protein Percentage 97.48%
cDNA percentage 95.57%
Ka/Ks Ratio 0.12516 (Ka = 0.0171, Ks = 0.1363)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2262 bp    Location:179318..237710   Strand:+
>bmy_20758
ATGTCACGGCGACGGCACAGCGACGAGAACGATGGGGGACAGCCTCACAAAAGGAGAAAGACCTCTGATGCAAATGAAACTGAAGATCATTTGGAATCTTTAATATGCAAAGTAGGAGAAAAGAGTGCCTGCTCTTTGGAGAGCAACCTAGAAGGCTTGGCTGGCGTTTTGGAAGCTGATCTTCCTAACTATAAGAGCAAGATCTTAAGGCTTCTTTGTACAGTTGCACGTCTGTTACCTGAGAAGTTGACAATTTATACAACATTAGTTGGACTACTAAATGCCAGGAATTACAACTTTGGTGGAGAATTTGTAGAAGCCATGATTCGTCAACTTAAAGAATCGTTGAAAGCAAACAATTATAATGAAGCTGTATATTTGGTCCGTTTTTTATCTGATCTTGTGAATTGTCACGTCATTGCTGCCCCATCAATGGTTGCTATGTTTGAAAATTTTGTAAGTGTAACTCAGGAAGAAGATGTGCCTCAGGTGCGCCGGGATTGGTACGTGTATGCATTTCTATCTTCTTTGCCCTGGGTTGGAAAGGAGTTGTACGAAAAGAAAGATGCAGAGATGGACCGAATCTTTGCCAACACTGAAAGCTATCTTAAAAGACGCCAGAAGACTCATGTGCCCATGTTACAAGTATGGACTGCAGAGAAACCGCATCCACAAGAAGAGTATTTAGATTGCCTCTGGGCCCAGATTCAGAAATTGAAAAAGGATCGCTGGCAGGAGCGGCACATCCTAAGACCTTATCTTGCCTTTGACAGCATCCTGTGTGAAGCACTGCAGCACAACCTGCCTCCTTTCACACCACCTCCTCACACTGAAGATTCGGTGTACCCGATGCCAAGGGTCATCTTCAGAATGTTTGATTACACGGATGATCCTGAGGGTCCTGTAATGCCAGGGAGTCATTCAGTGGAAAGATTTGTAATAGAAGAGAATCTTCACTGCATCGTTAAGTCCCACTGGAAGGAAAGGAAGACTTGTGCTGCACAGCTAGTGAGTTATCCTGGGAAGAACAAGATCCCCTTGAACTACCACATAGTTGAGCTTGCACAGGCAACTGAAATGTTATACATGCGTTTGGACACGATGAATACTACATGCGTAGACAGGTTTATTAACTGGTTTTCCCATCATCTAAGTAACTTCCAGTTCCGTTGGAGCTGGGAAGATTGGTCAGATTGTCTTGCTCAAGATCCAGAAAGTCCCAAACCAAAGTTTGTAAGAGAAGTTCTAGAAAAATGTATGAGGTTGTCTTACCATCAGCGTATATTAGATATTGTCCCTCCTACCTTCTCAGCTCTATGTCCTGCAAACCCAACCTGCATTTACAAGTATGGAGATGAAAGTAGCAACTCTCTTCCTGGACATTCGGTTGCCCTCTGTTTAGCTGTTGCCTTTAAAAGTAAAGCAACCAATGATGAAATCTTCAGCATTCTGAAAGATGTACCAAATCCTAACCAGGATGACGATGATGATGAAGGATTCAGCTTTAACCCATTGAAAATAGAGGTCTTTGTACAGACTCTGCTACACTTAGCGGCCAAGTCATTCAGTCACTCCTTCAGTGCTCTTGCAAAGTTTCATGAAGTCTTCAAAACCCTAGCTGAAAGTGATGAAGGAAAATTACATGTTCTAAGAGTCATGTTTGAGGTCTGGCGGAACCATCCACAGATGATTGCTGTACTAGTAGATAAGATGATTCGTACACAGATTGTTGACTGTGCTGCAGTAGCAAATTGGATCTTCTCTTCAGAACTATCTCGTGACTTTACTAGATTGTTTGTTTGGGAAATCTTGCACTCCACAATTCGTAAGATGAGCAAACACGTTCTTAAGATCCAGAAAGAGCTAGAAGAGGCTAAAGAAAAACTCGCAAGGCAACATAAACGGCGAAGTGACGATGACGACAGAAGCAGTGACAGGAAAGATGGGGCTCTTGAGGAACAAATAGAAAGACTGCAGGAAAAAGTGGAATCTGCTCAAAGTGAACAAAAGAATCTCTTCCTTGTCATATTTCAGCGTTTTATCATGATCTTGACCGAGCACTTAGTACGATGTGAAACTGACGGGACCAGTGTATTAACACCGTGGTATAAGAACTGTATAGAGAGGCTCCAGCAGATCTTCCTACAGCATCACCAAATAATCCAGCAGTACATGGTGACCCTGGAGAACCTGCTCTTCACTGCTGAATTAGACCCTCATATCCTGGCTATGTTCCAGCAGTTCTGTGCCCTGCAGGCCTAA

Related Sequences

bmy_20758T0 Protein

Length: 754 aa      View alignments
>bmy_20758T0
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEADLPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANNYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGPVMPGSHSVERFVIEENLHCIVKSHWKERKTCAAQLVSYPGKNKIPLNYHIVELAQATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWEDWSDCLAQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPANPTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFNPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQMIAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMSKHVLKIQKELEEAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMILTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILAMFQQFCALQA*