Part of scaffold_2617 (Scaffold)

For more information consult the page for scaffold_2617 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ALDH1A1 ENSTTRG00000014188 (Bottlenosed dolphin)

Gene Details

aldehyde dehydrogenase 1 family, member A1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013454, Bottlenosed dolphin)

Protein Percentage 90.97%
cDNA percentage 92.97%
Ka/Ks Ratio 0.63923 (Ka = 0.0568, Ks = 0.0889)

ALDH1A1 ENSBTAG00000008103 (Cow)

Gene Details

Retinal dehydrogenase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010661, Cow)

Protein Percentage 86.53%
cDNA percentage 89.05%
Ka/Ks Ratio 0.34129 (Ka = 0.0839, Ks = 0.2458)

ALDH1A1  (Minke Whale)

Gene Details

aldehyde dehydrogenase 1 family, member A1

External Links

Gene match (Identifier: BACU009500, Minke Whale)

Protein Percentage 74.69%
cDNA percentage 80.54%
Ka/Ks Ratio 0.74652 (Ka = 0.2143, Ks = 0.287)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1491 bp    Location:47024..19306   Strand:-
>bmy_20774
ATGGTAGTTGAGTTTGTACAGTATGCTGGAATTGAGCTGATGAAGACACAGCTTATGAGGAGTTTTAGTGTATTTTATAGGGTTATTGCCACTGGATTTGCTAATACATTTAGCCCACGAATTGAATTCTTTGACTTGCAGGAGGATGTTGACAAAGCAGTAAAGGCCGCAAGACAGTCTTTTCAGATTGGCTCTCCATGGCGTACTATGGATGCTTCAGAGAGAGGACGGCTAATAAACAAGTTGGCTGATTTAATCGAAAGAGATCGTCTGCTCCTGGCAACAATGGAGTCAATGAATGGTGGAAAACTATTTTCCGATGCATATCTGATGGATTTAGGAGGCTGTATAAAAACATTACGCTACTGTGCAGGCTGGGCTGACAAGATCCAGGGCCGCACGATACCCATTGATGGAAACTTTTTTACTTATACAAGAAATGAGCCTATTGGTGTGTGTGGCCAAATCATTCCTTGGAATTTCCCATTGGTCATGCTCATTTGGAAGATAGGGCCTGCCCTCAGCTGCGGAAACACAGTGGTTGTGAAACCAGCAGAGCAAACCCCTCTGACTGCTCTTCACATGGCATCTTTAATAAAAGAGGCAGGGTTTCCTCCTGGAGTAGTGAATATTGTCCCTGGTTACGGGCCTACTGCAGGGGCGGCCATTTCTTCTCACATGGATGTAGACAAAGTGGCCTTCACAGGATCAACACAGGTTGGCAAAATGATCAAAGAAGCTGCTGGGAAAAGCAATCTGAAGAGGGTGACCCTGGAACTCGGAGGAAAAAGTCCTTGCATTGTGTTTGCTGATGCCGACCTGGACAGTGCTGTTGCATTTGCACACCACGGGGTATTCTACCACCAGGGCCAATGTTGTATAGCTGCATCCCGGCTCTTTGTAGAAGAATCCATTTATGATGAGTTTGTTCGAAAGAGTGTTGAGCAGGCTAGAAAGTATGTTCTTGGAAATCCTCTAACCCCAGGCGTCAGTCAAGGCCCTCAGGATTACAGTTTCCAGATTGATAAGGAACAATATGAAAAAATACTTGACCTCATTGAAAGTGGGAAGAAGGAAGGGGCCAAACTGGAGTGTGGCGGAGGTCCATGGGGGAATAAAGGCTACTTTATCCAGCCCACGGTTTTCTCTAATGTTACTGATGAGATGCGCATTGCCAAAGAGGAGATATTTGGACCAGTGCAGCAAATCATGAAGTTTAAATCTTTAGATGATGTAATCAAGAGAGCAAACAATACTTTCTATGGCTTATCAGCAGGAATTTTTACCAAAGACATTGATAAAGCCATCACAGTCTCCTCTGCTCTGCAGGCCGGGACAGTGTGGGTTAACTGCTATAGTGTGGTATCTGCCCAGTGCCCCTTTGGTGGATTCAAGATGTCTGGAAATGGTCGAGAACTTGGAGAATATGGTCTCCATGAATACACAGAGGTCAAGACGGTCACAATCAAAATTTCTCAGAAGAACTCATAA

Related Sequences

bmy_20774T0 Protein

Length: 497 aa      View alignments
>bmy_20774T0
MVVEFVQYAGIELMKTQLMRSFSVFYRVIATGFANTFSPRIEFFDLQEDVDKAVKAARQSFQIGSPWRTMDASERGRLINKLADLIERDRLLLATMESMNGGKLFSDAYLMDLGGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRNEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKMIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVAFAHHGVFYHQGQCCIAASRLFVEESIYDEFVRKSVEQARKYVLGNPLTPGVSQGPQDYSFQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTKDIDKAITVSSALQAGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGLHEYTEVKTVTIKISQKNS*