Part of scaffold_2619 (Scaffold)

For more information consult the page for scaffold_2619 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TLR2 ENSTTRG00000004533 (Bottlenosed dolphin)

Gene Details

toll-like receptor 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004264, Bottlenosed dolphin)

Protein Percentage 95.03%
cDNA percentage 97.03%
Ka/Ks Ratio 0.66792 (Ka = 0.0253, Ks = 0.0379)

TLR2 ENSBTAG00000008008 (Cow)

Gene Details

toll-like receptor 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010530, Cow)

Protein Percentage 88.01%
cDNA percentage 91.54%
Ka/Ks Ratio 0.33183 (Ka = 0.059, Ks = 0.1777)

TLR2  (Minke Whale)

Gene Details

toll-like receptor 2

External Links

Gene match (Identifier: BACU013583, Minke Whale)

Protein Percentage 98.47%
cDNA percentage 98.98%
Ka/Ks Ratio 0.52901 (Ka = 0.0064, Ks = 0.0121)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2481 bp    Location:16124..7211   Strand:-
>bmy_20791
CGGGACCCCAGTCGTGCGGCTCGGGCCCGGGGAAGGGGGTGTCCCCGGCCCCGAGGCCGTCGACGCTCCCGCAGCCCCGTTTGCGAGGCCCCGCACGGGAATGTGCACACCCGCACCGCCGAGATGCCACCTGCATTGTGGACAGTGTGGGTCTTGGGGTCTGTAATCAGCCTCCCCAAAGAAGGAGCCTCTGATCAGGCTTCTTCTCTGTCTTGTGACCCCACTGGTGTCTGCGATGGCCGCTCCAGATCTTTCAACTCCATCCCCTCAGGGCTCACGGCAGCTGTGAAAAGCCTTGACCTGTCCAGCAATGAGATCACCTATGTCAGCAACAGTGACCTGCAGAGGTGTGTGAACCTCAGGACTTTGAGCCTGGGGGCCAATGAAATTCACACAGTGGAGGAAAATTCTTTTTTTTCCCTGAGGAGTCTTGAATATTTGGACTTATCCTATAATCGTTTATCTAACTTCTCATGCTCCTGGTTCAGATCCCTTTCTGCCTTGAAATTCTTAAACTTACTGGGAAATTTATACAAAACACTCGGGGAAAGATCTCTTTTTTCTCATCTTCCAAATCTGCGAATCCTGAAAGTAGGAAATAGTAACAGCTTCACTGAGATTCAGGAAAAGGATTTCGCTGGGCTAACTCTTCTTGAGAAACTTGAGATTAATGCTCCAAATCTGCAGACGTATGCGCCAAAGAGTTTAAAGTCAATCCAGAACATCAGCCATCTGATTCTTCATCTGAAGCAGCCTATTTTACTGCTGGAGATTTTTGTAGATATTTTAAGTTCCTTAGAATGTTTAGAACTGAGAGATACTAATTTGAACACTTTTCATTTTTCAGAAGTATCCATCAATGAAACGAATACATCGATTAAAAAGTTTACATTTAGAAATGTGCAAATCACTGACGAAAGTTTTATTGAAGTTGTGAAACTGTTTAATTATGTTTCTGGAGTCTTAGAAGTAGAGTTTGATGACTGTACCCATGATGGAGTTGGTGATTTTAGGACATTGACTCTGGACACAATTAAATACCTAGGTGACGTGGAGACATTAACAATACGGAAGTTGCATATTCCACAGTTTTTCTTATATCATGATCTGAGTAATATATATTCACTCACAGGAAAAGTTAAAAGAATCACAATAGAAAACAGTAAGGTTTTTCTGGTTCCTTGTTTACTTTCACAACATTTAAAATCATTAGAATATTTGGATCTCAGTGAAAACTTAATGTCTGAAGAAACCTTGAAAAACTCAGCCTGTGAGCATGCTTGGCCCTTCCTAAAAACCTTAGTTTTAAGGCAGAATCGTTTGAAATCATTAGAAAAAACTGGAGAAATTTTGCTTACTCTGCAAAACCTGACTAACCTTGATATCAGTAAGAATAATTTTCATTCAATGCCTGAAACTTGTCAGTGGCCAGGAAAAATGAAATATTTGAACTTATCCAGCACAAGAATACAAAGTTTAACCCGTTGCATTCCCCAGACACTGGAAATTTTAGATATTAGCGATAACAATCTCGATTCATTTTCTTTGATTTTGCCAGAACTCAAAGAACTTTATATTTCCAGAAATAAGTTGAAGACTCTACCAGATGCCTCCTTCTTACCTGTGTTATTAGTTATGAGAATCAGCAGAAATATAATAAATACTTTCTCTAAGGAGCAACTTGATTCTTTTCAAAAACTGAAGACTTTGGAAGCTGGTGGCAACAGCTTCATTTGCTCCTGTGACTTCCTGTCTTTCACTCAGGGGCAGCAGGCCCTGGCCCAGGTCCTGATCGACTGGCCAGAAGACTACCTGTGTGACTCTCCATCCCCCGTGCGGGGCCAGCGCGTTCAGGACACCCGGCTCTCACCTTCTGAATGCCACAGGGCAGCCGTGGTGTCTGCCGTGTGCTGTGCCCTTTTCCTGTTGCTCCTGCTYGYGGGGRTTCTGTGCCACCGTTTCCACGGACTGTGGTACATGAAGATGATGTGGGCCTGGCTCCAGGCCAAGAGGAAGCCCAGGAAGGCTCCCCGCAGGGACATCTGCTATGACGCCTTTGTGTCCTACAGTGAACGGGATTCCTACTGGGTGGAGAACCTCATGGTCCAGGAGCTGGAGCACTTCAACCCTCCCTTTAAGTTGTGTCTTCACAAGCGGGACTTCATTCCTGGCAAGTGGATTATTGACAATATCATTGACTCCATTGAAAAGAGCCACAAAACCATCTTTGTGCTTTCTGAGAACTTTGTGAAGAGTGAGTGGTGCAARTACGAGCTGGACTTCTCCCATTTTCGTCTCTTTGATGAGAACGACGATGCTGCCATTCTCATTCTGCTGGAGCCCATTGAGAAAAAGGCCATCCCCCAGCGTTTCTGTAAGCTGCGGAAGATTATGAACACCAAGACCTACTTGGAGTGGCCCGCTGATGAGATGCAGCAGGAAGGGTTTTGGTTAAATTTGAGAGCTGCGATAAAGTCCTAG

Related Sequences

bmy_20791T0 Protein

Length: 827 aa      View alignments
>bmy_20791T0
RDPSRAARARGRGCPRPRGRRRSRSPVCEAPHGNVHTRTAEMPPALWTVWVLGSVISLPKEGASDQASSLSCDPTGVCDGRSRSFNSIPSGLTAAVKSLDLSSNEITYVSNSDLQRCVNLRTLSLGANEIHTVEENSFFSLRSLEYLDLSYNRLSNFSCSWFRSLSALKFLNLLGNLYKTLGERSLFSHLPNLRILKVGNSNSFTEIQEKDFAGLTLLEKLEINAPNLQTYAPKSLKSIQNISHLILHLKQPILLLEIFVDILSSLECLELRDTNLNTFHFSEVSINETNTSIKKFTFRNVQITDESFIEVVKLFNYVSGVLEVEFDDCTHDGVGDFRTLTLDTIKYLGDVETLTIRKLHIPQFFLYHDLSNIYSLTGKVKRITIENSKVFLVPCLLSQHLKSLEYLDLSENLMSEETLKNSACEHAWPFLKTLVLRQNRLKSLEKTGEILLTLQNLTNLDISKNNFHSMPETCQWPGKMKYLNLSSTRIQSLTRCIPQTLEILDISDNNLDSFSLILPELKELYISRNKLKTLPDASFLPVLLVMRISRNIINTFSKEQLDSFQKLKTLEAGGNSFICSCDFLSFTQGQQALAQVLIDWPEDYLCDSPSPVRGQRVQDTRLSPSECHRAAVVSAVCCALFLLLLLXGXLCHRFHGLWYMKMMWAWLQAKRKPRKAPRRDICYDAFVSYSERDSYWVENLMVQELEHFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVKSEWCKYELDFSHFRLFDENDDAAILILLEPIEKKAIPQRFCKLRKIMNTKTYLEWPADEMQQEGFWLNLRAAIKS*