Sequence details bmy_20812 (Coding sequence)

Part of scaffold_2652 (Scaffold)

For more information consult the page for scaffold_2652 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM55 ENSBTAG00000021009 (Cow)

Gene Details

tripartite motif-containing protein 55

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044300, Cow)

Protein Percentage 89.82%
cDNA percentage 86.87%
Ka/Ks Ratio 0.14551 (Ka = 0.0752, Ks = 0.517)

Additional orthologs identified in other species via the OPTIC pipeline.

TRIM55 (Human)   Trim55 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 681 bp    Location:9413..19441   Strand:+
Raw sequence 
>bmy_20812
ATGAGCGCGTCTTTGAATTACAAGTCTTTTTCCAAAGAGCAGGAGACCATGGATAACTTGGAGAAGCAACTCATCTGTCCCATCTGCTTAGAGATGTTCACGAAACCCGTGGTCATTCTCCCCTGCCAGCATAACCTGTGTAGGAAATGTGCCAGTGACATTTTCCAGGCCTCTAACCCGTACTTGCCCACAAGAGGAGGTAGCACTGTGGCCTCGGGGGGCCGATTCCGTTGCCCATCCTGCAGACACGAAGTGGTTTTGGACAGACATGGGATCTACGGGCTTCAGAGGAACCTGCTGGTGGAAAATATCATTGACATCTACAAGCAGGAGTCCACCAGACCAGAAAAGAAGTCCGACCAGCCCCTGTGTGAGGAGCACGAAGACGAGCGCATCAACATCTACTGTCTGAACTGCGAAGTGCCCACCTGCTCTCTGTGCAAGGTCTTTGGGGCCCACAAGGACTGCCAGGTGGCTCCCCTCACGCACGTGTTCCAGAGGCAGAAGTCTGAGCTCAGCGACGGCATTGCTGTCCTTGTGGGAAGCAATGATCGGGTCCAGGGAGTGATCAGCCAGCTGCAGGACACCTGCAAAACGATCGAGGTGAGTCAGGTGGCCTCAAGGGAGTGTAAACCGTGCCTGAACCCCTGGGGTTTTGTGGCTTCCTCAACGCCACCCTAG

Related Sequences

bmy_20812T0 Protein

Length: 227 aa      
>bmy_20812T0
MSASLNYKSFSKEQETMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNPYLPTRGGSTVASGGRFRCPSCRHEVVLDRHGIYGLQRNLLVENIIDIYKQESTRPEKKSDQPLCEEHEDERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAVLVGSNDRVQGVISQLQDTCKTIEVSQVASRECKPCLNPWGFVASSTPP*