Part of scaffold_2652 (Scaffold)

For more information consult the page for scaffold_2652 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM55 ENSTTRG00000004359 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 55

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004097, Bottlenosed dolphin)

Protein Percentage 85.02%
cDNA percentage 89.36%
Ka/Ks Ratio 0.75987 (Ka = 0.1093, Ks = 0.1438)

TRIM55 ENSBTAG00000021009 (Cow)

Gene Details

tripartite motif-containing protein 55

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027975, Cow)

Protein Percentage 81.17%
cDNA percentage 84.42%
Ka/Ks Ratio 0.39418 (Ka = 0.1326, Ks = 0.3364)

TRIM55  (Minke Whale)

Gene Details

tripartite motif containing 55

External Links

Gene match (Identifier: BACU011112, Minke Whale)

Protein Percentage 87.11%
cDNA percentage 90.99%
Ka/Ks Ratio 0.7563 (Ka = 0.0916, Ks = 0.1211)

Genome Location

Sequence Coding sequence

Length: 1152 bp    Location:34719..38888   Strand:+
>bmy_20813
ATGACCCAAGTCATCACCCGAACCCAAGAGGAGAAGCTGGAACATGTCCGTGCTCTCATCAAAAAGTATTCTGACCATTTGGAGAACGTGTCAAAGTTGGTTGAGTCAGGAATACAGTTCATGGATGAGCCGGAAATGGCAGTGTTTCTGCAGAATGCCAAAACCCTGTTACAAAAAATTTCTGAAGCATCGAAGGCATTTCAGATGGAGAAAATAGAACATGGTTATGAGAACATGAACCACTTTGCAGTCAACCTCAGTAGAGAAGAAAAAATAATACGCGAAATTGATTTTTACAGAGAAGATGAAGATGAAGAAGAAGGAGAAGAAGGAGACGGAGAGGGACAGGGAGAAGGAGGAGAGGGAGAGGGAGAAGGAGGAGAGGTAGTAGAAGTGGAAGAGGCGGAAAATGTTCAAACAGAGTCATCAGGAGGAGATGAAAGTCCAGAGAAAGGCCTGGAGCCCTCTCCGCCCGCCTTGGAGCTCCAGGCTGCCCCAGAGCCTCCTCCAGCCCTGCCACCCGCTGCCGATGCCCCGGTGACACAGGGGGAGGTTGCGCCCACTGGCTCTCAGCAGACCACAGAGTCTGAAACTCCAGTCCCTGCAGCAACGGACACTGCGGATCCCTTGCTTTACCCTAGTTGGTATAAAGGCCAAACGCGGAAAACCACCACCAACCCACCTTCCACCCCAGGGAGCGAAGGTCTGGGGCACGTAGGGCCTTCAGGTTCTGAGGATCCGAATGTGCGGAAGGCAGAAGGGGCAGAAGCCGCAGCCAGTGAGAGGGCAGCAGTGAGTGGTAAGGAAACTAGCTCACCTGCGGCTACTTCTCAGGTCAGTGTCGATGCTCTGGTGTCTGAATGCTACCCCCCGTGCCGCCCGGGGTCCAGCCGGGATGACGGCAAGAAGGAAGGGCTTCCAAAGGGGCAGAGAGAACCCAGGGCCTTGGGCAAAACAGAAGCAACTCACGCCCCCGTGTTGGCTTGTTTCTCTAAGCCTTACATGAAACACAAGAAACACAAATTTGACTTCACTCTGCCCATGCGTGGCGACCTCATACCTGGCTTCCCAGGGGAGGGGTGCAAGCGAGCCTGGCCCTTAGGCCTGCAGGTGAAAGCTGCTCCGTCTGCAGTGGCTGGCTGGTGTCCCTAG

Related Sequences

bmy_20813T0 Protein

Length: 384 aa      View alignments
>bmy_20813T0
MTQVITRTQEEKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLQKISEASKAFQMEKIEHGYENMNHFAVNLSREEKIIREIDFYREDEDEEEGEEGDGEGQGEGGEGEGEGGEVVEVEEAENVQTESSGGDESPEKGLEPSPPALELQAAPEPPPALPPAADAPVTQGEVAPTGSQQTTESETPVPAATDTADPLLYPSWYKGQTRKTTTNPPSTPGSEGLGHVGPSGSEDPNVRKAEGAEAAASERAAVSGKETSSPAATSQVSVDALVSECYPPCRPGSSRDDGKKEGLPKGQREPRALGKTEATHAPVLACFSKPYMKHKKHKFDFTLPMRGDLIPGFPGEGCKRAWPLGLQVKAAPSAVAGWCP*