Part of scaffold_2652 (Scaffold)

For more information consult the page for scaffold_2652 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CRH ENSTTRG00000004366 (Bottlenosed dolphin)

Gene Details

corticotropin releasing hormone

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004102, Bottlenosed dolphin)

Protein Percentage 96.89%
cDNA percentage 98.45%
Ka/Ks Ratio 0.88379 (Ka = 0.0137, Ks = 0.0155)

CRH ENSBTAG00000033128 (Cow)

Gene Details

Corticoliberin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044298, Cow)

Protein Percentage 79.89%
cDNA percentage 86.95%
Ka/Ks Ratio 0.393 (Ka = 0.1122, Ks = 0.2854)

CRH  (Minke Whale)

Gene Details

corticotropin releasing hormone

External Links

Gene match (Identifier: BACU011113, Minke Whale)

Protein Percentage 97.93%
cDNA percentage 98.79%
Ka/Ks Ratio 0.57721 (Ka = 0.0091, Ks = 0.0157)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 582 bp    Location:57455..56874   Strand:-
>bmy_20814
ATGCGGCTGCCGCTGCTCGTGTCCGCGGGCGTCCTGCTGGTGGCTCTCCTGCCCTGCCCGCCGTGCAGGGCCCTCCTTAGACGGGGGCCCGTCCCGGGGGCCCGGCAGGCCTCGCAGCACCCCCAGCCCCTGGATTTCTTCCAGCCTTCGCCGCAGCCTCAGCAGCCGCAGGCTCGGCCCGTCCTGCTCCGCATGGGGGAGGAGTACTTCCTCCGCCTGGGTAGCCTCAATAAGAGCCCCGCTGCTCCGCTCTCGCCCGCCTCCTCGCCTCCTGCCGGCAGCAGCGGCAGCCGCCTTTCGCCGGACGAGGTGGCCGCCAACTTTTTCCGCGCGTTGCTGCAGCAGCTGCCGCTGCCCCGGCGCCCGCTCGACAGCCCTGCGAGTCCGTTGGAACGCGGCGCCGAGAACGCCCTCGGCGGCCGCCAGGAGGCACCGGAGAGRGAGAGGCGAGCCGAGGAACCTCCCATCTCCCTGGATCTCACCTTCCACCTCCTCCGAGAAGTCTTGGAAATGGCCAGGGCTGAGCAGTTAGCGCAGCAAGCTCACAGCAACAGGAAACTGATGGAGATTATTGGGAAATGA

Related Sequences

bmy_20814T0 Protein

Length: 194 aa      View alignments
>bmy_20814T0
MRLPLLVSAGVLLVALLPCPPCRALLRRGPVPGARQASQHPQPLDFFQPSPQPQQPQARPVLLRMGEEYFLRLGSLNKSPAAPLSPASSPPAGSSGSRLSPDEVAANFFRALLQQLPLPRRPLDSPASPLERGAENALGGRQEAPERERRAEEPPISLDLTFHLLREVLEMARAEQLAQQAHSNRKLMEIIGK*