Part of scaffold_2646 (Scaffold)

For more information consult the page for scaffold_2646 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V0B ENSTTRG00000001290 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001210, Bottlenosed dolphin)

Protein Percentage 64.84%
cDNA percentage 64.47%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0451)

ATP6V0B ENSBTAG00000018889 (Cow)

Gene Details

V-type proton ATPase 21 kDa proteolipid subunit

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025144, Cow)

Protein Percentage 99.51%
cDNA percentage 96.1%
Ka/Ks Ratio 0.01478 (Ka = 0.0023, Ks = 0.1561)

ATP6V0B  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b

External Links

Gene match (Identifier: BACU005825, Minke Whale)

Protein Percentage 90.0%
cDNA percentage 94.0%
Ka/Ks Ratio 0.50228 (Ka = 0.0512, Ks = 0.1019)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 618 bp    Location:84607..81264   Strand:-
>bmy_20845
ATGACTGGGCTAGTGCTGCTCTACTCCGGGGTCTTCGTGGCCTTCTGGGCCTGCATGCTCGTCGTGGGAATCTGCTACACCATTTTTGACTTGGGCTTCCGCTTTGATGTGGCATGGTTCCTGACGGAGACTTCCCCCTTCATGTGGTCAAACCTGGGCATTGGCCTAGCTATCTCTCTGTCTGTGGTTGGGGCAGCATGGGGCATCTATATCACTGGCTCTTCTATCATTGGGGGAGGGGTGAAGGCCCCCAGGATTAAGACGAAGAACCTGGTCAGCATCATCTTCTGTGAGGCTGTGGCCATCTATGGCATCATCATGGCGATTGTCATTAGCAACATGGCTGAGCCTTTCAGTGCTACTGACCCCAAGGCCATTGGCCATCGAAACTACCATGCAGGTTACTCCATGTTTGGGGCTGGCCTCACAGTGGGCCTGTCTAACCTCTTCTGTGGAGTGTGCGTGGGCATCGTGGGCAGTGGTGCCGCCTTGGCTGATGCACAGAACCCCAGCCTCTTTGTAAAGATTCTCATTGTGGAGATCTTCGGCAGCGCCATCGGCCTCTTTGGGGTCATCGTTGCRATCCTTCAGACCTCCAGAGTGAAGATGGGTGATTAG

Related Sequences

bmy_20845T0 Protein

Length: 206 aa      View alignments
>bmy_20845T0
MTGLVLLYSGVFVAFWACMLVVGICYTIFDLGFRFDVAWFLTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSRVKMGD*