Sequence detailsbmy_20847 (Coding sequence)

Part of scaffold_2646 (SequenceType object (1))

For more information consult the page for scaffold_2646 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IPO13ENSTTRG00000001287 (Bottlenosed dolphin)

Gene Details

importin 13

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001207, Bottlenosed dolphin)

Protein Percentage 97.92%
cDNA percentage 97.37%
Ka/Ks Ratio 0.07475 (Ka = 0.0026, Ks = 0.0346)

IPO13ENSBTAG00000018887 (Cow)

Gene Details

Importin-13

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025142, Cow)

Protein Percentage 99.27%
cDNA percentage 96.61%
Ka/Ks Ratio 0.02542 (Ka = 0.0034, Ks = 0.1353)

IPO13 (Minke Whale)

Gene Details

importin 13

External Links

Gene match (Identifier: BACU000352, Minke Whale)

Protein Percentage 98.34%
cDNA percentage 98.27%
Ka/Ks Ratio 0.58125 (Ka = 0.0153, Ks = 0.0263)

Additional orthologs identified in other species via the OPTIC pipeline.

IPO13 (Human)   Ipo13 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2970 bp    Location:111307..91531   Strand:-
Raw sequence 
>bmy_20847
ATGGAGCGGCGGGAGGAGCAGCCCGGGGCTGCAGGGGCTGGAGCAGCACCAGCCTTGGACTTCACTGTGGAGAACGTGGAGAAGGCGCTGCACCAGCTCTACTACGACCCCAACATTGAGAACAAGAACCTGGCTCAGAAGTGGCTGATGCAGGCCCAGGTCTCCCCACAGGCCTGGCACTTCAGCTGGCAGCTCCTGCAGCCCAACAAGGTGCCTGAGATCCAGTACTTTGGGGCCAGTGCCCTGCACATCAAGATCTCTCGCTACTGGAGTGACATCCCCACTGACCAGTATGAGAGTCTAAAGGCACAGCTCTTCACCCAGATCACCCGCTTTGCCAGTGGCTCCAAGATTGTGCTGACTCGGCTGTGCGTGGCACTGGCCTCGCTGGCTCTCAGCATGATGCCTGACGCTTGGCCGTGTGCTGTGGCAGATATGGTGCGGCTCTTCCAGGCTGAGGACTCACCGGTGGATGGCCAGGGCCGCTGCCTGGCCCTGCTAGAGCTGCTGACAGTGCTGCCCGAGGAGTTCCAGACCAGCCGCCTGCCCCAGTATCGCAAAAGCCTGGTGCGGGCCAGCCTGGCAGTGGAGTGTGGGGCTGTCTTCCCGCTGCTGGAGCAGCTGCTGCAGCAGCCCAGCTCACCCAGCTGTGTGCGTCAGAAGGTGCTCAAGTGCTTTTCCAGCTGGGTGCAGCTGGAGGTGCCCCTGCAGGACTGTGAGGCGCTCATTCAGGCTGCCTTCGCTGCTCTGCAGGACTCGGAGCTCTTCGACAGCAGCGTGGAGGCCATCGTCAATGCCATCTCGCAGCCTGATGCCCAGAGGTATGTGAACACACTCCTGAAACTCATCCCGCTGGTACTGGGACTGCAGGATCAACTGCGACAGGCAGTGCAGAATGGGGACATGGAGACCTCCCATGGCATCTGTCGCATTGCTGTGGCCCTGGGCGAGAACCACTCCCGGGCCTTGCTGGACCAAGTGGAGCACTGGCAGAGCTTTCTGGCCCTTGTCAACATGATCATGTTCTGCACGGGCATCCCTGGCCACTTCCCTGTCAATGAGACCACCAGCTCCCTGACCCTCACCTTCTGGTACACGCTGCAGGATGACATTCTGTCCTTTGAGGCAGAGAAGCAGGCTGTGTACCAGCAGGTATACCGGCCAGTCTACTTCCAGCTGGTAGATGTGCTTCTGCACAAGGCCCAGTTCCCTTCTGATGAAGAATATGGATTCTGGTCCTCAGATGAGAAGGAGCAGTTTCGAATTTACAGGGTGGACATCTCAGACACGCTCATGTATGTCTATGAGATGCTGGGGGCCGAGCTGCTCAGCAACCTCTATGACAAGCTGGGCCGTTTGCTTACCAGCTCAGAGGAGCCCTACTCCTGGCAGCACACAGAGGCCCTGCTCTATGGCTTCCAATCCATCGCGGAGACCATCGATGTCAACTATTCTGATGTGGTGCCCGGGCTCATTGGCCTCATCCCACGGATCAGCATCAGCAATGTGCAGCTGGCGGACACTGTCATGTTCACCATTGGAGCTCTGTCTGAATGGCTGGCTGACCACCCCGTCATGATCAACAGCGTTCTACCCCTAGTACTGCATGCCCTAGGCAATCCCGAGCTCTCTATCTCTTCTGTGTCCACCCTCAAGAAGATCTGCCGAGAATGCAAGTATGACCTGCCGCCCTATGCTGCCAACATCGTGGCTGTCTCCCAGGATGTGCTGATGAAACAGATCCATAAGACGAGCCAGTGCATGTGGCTGATGCAGGCACTGGGCTTCCTGCTGTCGGCCCTACAAGTGGAGGAGATCCTTAAAAACCTGCACTCGCTCATCTCGCCGTATATCCAGCAGCTGGAGAAGCTGGCAGAGGAGATACCTAATCCCTCCAACAAGCTGGCCATTGTCCACATCTTGGGGCTTCTCTCCAACCTCTTCACCACGCTGGACATCAGTCATCATGAAGATGATCATGAAGGCTCTGAGCTCCGGAAGCTGCCAGTGCCGCAGGGACCCAACCCTGTGGTGGTGGTACTGCAGCAGGTCTTCCAGCTTATCCAGAAGGTGCTGAGCAAATGGCTGAATGATGCCCAGGTGGTGGAGGCGGTGTGCGCTATCTTCGAGAAGTCAGTTAAGACGCTGCTGGACGACTTTGCCCCCATGGTGCCACAGCTGTGTGAGATGCTGGGTCGGATGTACAGCACCATCCCTCAGGCCTCCGCTCTTGACCTCACTCGACAGCTGGTCCACATCTTTGCTCATGAGCCTGCCCACTTTCCCCCAATTGAGGCCCTCTTCCTGCTCGTCACCTCCATCACACTCACCCTCTTCCAGCAAGGGCCCAGGGATCATCCTGATATTGTTGATTCATTTATGCAACTCCTGGCACAGGGGGCCTCAACTGCCTCTGTGAATCAGAGTGAAGTCACTGCTGGCAACCTGGAGCCTGCAGGAGGTCTGGCCCTGATGGCTCTGAAGCGGAAGCCAGATTTGTTCCTGTGTGAACGATTGGATGTCAAAGCTGTGTTCCAGTGTGCTGTGCTGGCCCTCAAGTTCCCCGAAGCACCTACTGTCAAGGCCTCCTGTGGCTTCTTTACAGAGCTGCTGCCTCGGTGTGGGGAAGTAGAACCTGTGGGAAAGGTGGTACAGGAGGATGGCCGTATGCTGCTCATAGCAGTGCTGGAGGCCATTGGGGGCCAGGCCTCCCGCAGCCTCATGGACTGCTTTGCCGACATCCTATTTGCTCTGAACAAACACTGCTTCAGCCTCCTGAGTGTGTGGATCAAGGAGGCACTTCAGTCACCTGGTTTTCCCTCTGCCCGCCTCAGCCCTGAACAGAAGGACACCTTCAGCCAACAGATCCTTCGTGAGCGAGTAAACAAGAGGCGGGTGAAGGAGATGGTGAAAGAGTTCACACTGCTGTGCCGGGGGCTACATGGCACAGATTACACAGCTGACTACTGA

Related Sequences

bmy_20847T0 SequenceType object (3)

Length: 990 aa      View alignments
>bmy_20847T0
MERREEQPGAAGAGAAPALDFTVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAWHFSWQLLQPNKVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKSLVRASLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQDQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHFPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSISSVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISHHEDDHEGSELRKLPVPQGPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSITLTLFQQGPRDHPDIVDSFMQLLAQGASTASVNQSEVTAGNLEPAGGLALMALKRKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCGEVEPVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSVWIKEALQSPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGTDYTADY*