Part of scaffold_2654 (Scaffold)

For more information consult the page for scaffold_2654 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PARVB ENSTTRG00000015336 (Bottlenosed dolphin)

Gene Details

parvin, beta

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014537, Bottlenosed dolphin)

Protein Percentage 82.3%
cDNA percentage 82.89%
Ka/Ks Ratio 0.19672 (Ka = 0.0137, Ks = 0.0698)

PARVB ENSBTAG00000021978 (Cow)

Gene Details

beta-parvin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029307, Cow)

Protein Percentage 97.79%
cDNA percentage 94.1%
Ka/Ks Ratio 0.02973 (Ka = 0.0095, Ks = 0.3198)

PARVB  (Minke Whale)

Gene Details

parvin, beta

External Links

Gene match (Identifier: BACU013689, Minke Whale)

Protein Percentage 77.66%
cDNA percentage 84.43%
Ka/Ks Ratio 0.46044 (Ka = 0.1514, Ks = 0.3288)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 681 bp    Location:2916..39370   Strand:+
>bmy_20855
GTTCTCATCAACTGGGTCAACGACGTGCTGGTGGAGGAGAGGATCATCGTAAAGCAGCTGGAGGAGGACCTGTACGACGGGCAGGTGCTGCAGAAGCTCCTGGTGATTCACGGGAAGAACCTGGTGGCCACCCTCCACCTCCTCGTGGCCCTGGCCATGCACTTCCGGGCCCCGATCCGCCTTCCCGAACACGTCTCCGTGCAAGTGGTGGTCGTACGGAAGCGGGAAGGCCTGCTGCACTCCAGCCACGTCACGGAGGAGCTGACCACGACCACCGAGATGATGATGGGTCGGTTTGAGCGGGACGCCTTTGACACGCTCTTCGACCACGCCCCGGACAAGCTCAGTGTCGTGAAGAAGTCTCTCATCACGTTTGTGAACAAGCACCTGAACAAGCTGAATTTGGAGGTGACGGAACTAGAGACCCAGTTTGCAGATGGCGTGTACCTGGTTCTGCTCATGGGGCTTCTGGAAGACTACTTTGTACCGCTGCACAACTTCTACCTGACCCCGGACAGCTTCGATCAGAAGGTCCACAACGTGTCGTTTGCCTTTGAGCTGATGCTGGATGGAGGCCTTAAGAAGCCCAAGGCTCGCCCCGAAGATGTGGTGAACCTGGACCTCAAATCCACCCTGCGGGTTCTTTACAACCTGTTCACCAAATACAAGCACCTGGAGTGA

Related Sequences

bmy_20855T0 Protein

Length: 227 aa      View alignments
>bmy_20855T0
VLINWVNDVLVEERIIVKQLEEDLYDGQVLQKLLVIHGKNLVATLHLLVALAMHFRAPIRLPEHVSVQVVVVRKREGLLHSSHVTEELTTTTEMMMGRFERDAFDTLFDHAPDKLSVVKKSLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEDYFVPLHNFYLTPDSFDQKVHNVSFAFELMLDGGLKKPKARPEDVVNLDLKSTLRVLYNLFTKYKHLE*