Part of scaffold_2660 (Scaffold)

For more information consult the page for scaffold_2660 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC3B ENSTTRG00000000544 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 3B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000508, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.68%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0398)

LRRC3B ENSBTAG00000033140 (Cow)

Gene Details

Leucine-rich repeat-containing protein 3B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044315, Cow)

Protein Percentage 99.56%
cDNA percentage 93.98%
Ka/Ks Ratio 0.00809 (Ka = 0.0021, Ks = 0.2593)

LRRC3B  (Minke Whale)

Gene Details

leucine rich repeat containing 3B

External Links

Gene match (Identifier: BACU004900, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.27%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0215)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 684 bp    Location:205928..205245   Strand:-
>bmy_20861
ATGTGTCCCAAGGGCTGTCTTTGTTCTTCCTCTGGGGGTTTAAATGTCACCTGTAGCAATGCAAATCTCAAGGAAATACCTAGAGATCTTCCTCCTGAAACAGTCTTACTGTATCTGGACTCCAATCAGATCACATCTATCCCCAATGAGATTTTTAAGGACCTCCATCAACTAAGAGTTCTCAACCTGTCCAAAAATGGCATTGAGTTTATCGATGAGCATGCCTTCAAAGGAGTCGCTGAAACTCTGCAGACTCTGGACTTGTCTGACAACCGGATTCAGAGCGTGCACAAAAACGCTTTCAATAACCTGAAGGCCAGGGCCAGGATTGCCAACAACCCCTGGCACTGCGACTGTACGCTCCAGCAAGTTCTGAGGGGCATGGTGTCCAATCACGAGACAGCCCACAATGTGATCTGCAAGACCTCCGTGCTGGATGAACACGCCGGGAGACCGTTCCTCAACGCTGCCAATGATGCTGACCTTTGTAACCTCCCTAAAAAAACGACTGATTATGCCATGCTGGTCACCATGTTTGGCTGGTTCACCATGGTGATCTCGTATGTGGTGTATTATGTGAGGCAAAATCAGGAAGACGCGCGAAGACACCTTGAATACTTGAAATCCCTGCCGAGCAGGCAAAAGAAAGCCGACGAACCCGACGATATTAGTACGGTGGTGTAG

Related Sequences

bmy_20861T0 Protein

Length: 228 aa      View alignments
>bmy_20861T0
MCPKGCLCSSSGGLNVTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRGMVSNHETAHNVICKTSVLDEHAGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVISYVVYYVRQNQEDARRHLEYLKSLPSRQKKADEPDDISTVV*