Sequence detailsbmy_20874 (Coding sequence)

Part of scaffold_2695 (SequenceType object (1))

For more information consult the page for scaffold_2695 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CACFD1ENSTTRG00000014224 (Bottlenosed dolphin)

Gene Details

calcium channel flower domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013480, Bottlenosed dolphin)

Protein Percentage 94.39%
cDNA percentage 96.26%
Ka/Ks Ratio 0.15166 (Ka = 0.0229, Ks = 0.1513)

CACFD1 (Minke Whale)

Gene Details

calcium channel flower domain containing 1

External Links

Gene match (Identifier: BACU016158, Minke Whale)

Protein Percentage 95.38%
cDNA percentage 97.95%
Ka/Ks Ratio 0.58789 (Ka = 0.0192, Ks = 0.0326)

Additional orthologs identified in other species via the OPTIC pipeline.

MGC139698 (Cow)   CACFD1 (Human)   Cacfd1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 519 bp    Location:211198..202573   Strand:-
Raw sequence 
>bmy_20874
ATGAGCGGTGCGGGCGGAGCGGCGGTGGCGTCCGTGAGCTCGGCGCCGCCCGCGCAGGAGGAGGGCATGACATGGTGGTACCGCTGGCTGTGTCGCCTGTCGGGGGTGTTAGGGGCCGTCTCTTGCGCCATCTCCGGCCTCTTCAACTGCATCACCGTCCACCCTCTGAACATTGCGGCCGGCGTGTGGATGATCATGAACGCGTTCGTCCTACTGCTTTGTGAGGCGCCCTTCTGCTGCCACTTCATTGAGTTTGCGAACACGGTGGCGGCGAAGGTGGACCGGCTGCGCTCCTGGCAGAAGGCCGTCTTCTACTGCGGGATGGCCGTCGTTCCCATCGTCATCAGCCTGACCCTGACCACACTGCTGGGCAACGCCATCGCCTTCGCCACCGGAGTGCTGTACGGACTGTCTGCTCTGGGCAAGAAGGGCGACGCGATCTCCTACGCCAGGATCCAGCAGCAGAAGCAGCAGGCAGACGAGGAGAAGCTCACAGACGCCCTGGAGGGGCAGCTGTGA

Related Sequences

bmy_20874T0 SequenceType object (3)

Length: 173 aa      
>bmy_20874T0
MSGAGGAAVASVSSAPPAQEEGMTWWYRWLCRLSGVLGAVSCAISGLFNCITVHPLNIAAGVWMIMNAFVLLLCEAPFCCHFIEFANTVAAKVDRLRSWQKAVFYCGMAVVPIVISLTLTTLLGNAIAFATGVLYGLSALGKKGDAISYARIQQQKQQADEEKLTDALEGQL*