Part of scaffold_2693 (Scaffold)

For more information consult the page for scaffold_2693 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THUMPD1 ENSTTRG00000016435 (Bottlenosed dolphin)

Gene Details

THUMP domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015579, Bottlenosed dolphin)

Protein Percentage 95.81%
cDNA percentage 96.83%
Ka/Ks Ratio 0.38405 (Ka = 0.0235, Ks = 0.0612)

THUMPD1 ENSBTAG00000047673 (Cow)

Gene Details

THUMP domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054288, Cow)

Protein Percentage 93.28%
cDNA percentage 93.56%
Ka/Ks Ratio 0.20058 (Ka = 0.0347, Ks = 0.1728)

THUMPD1  (Minke Whale)

Gene Details

THUMP domain containing 1

External Links

Gene match (Identifier: BACU013852, Minke Whale)

Protein Percentage 99.16%
cDNA percentage 99.07%
Ka/Ks Ratio 0.16059 (Ka = 0.0029, Ks = 0.0182)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1077 bp    Location:51045..46615   Strand:-
>bmy_20955
ATGGCGTCCCCCGTCCAGCAGTCTCCTCAGCCTGGCGGCGGGAAGCGCAAAGGCAAGGCTCAGTACGTGCAGGCCAAACGGGCTCGGCGCTGCGATGGCGGCGGGCCCCGGCAGCTGGAGCCCGGGCTACAGGGCATTCTCATCACCTGTAACATGAACGAGCGCAAGTGCGTGGAGGAGGCCTACAGCCTGCTCAACGAATACGGCGACGACATGTATGGTCCAGAAAAGTTTGCAGACAAGGATCAGCAACTCTCTGGAAGTGAGGGAGAAGATGATGATGTGGAGGCCGCCTTGAAGAAAGAAGTTGGTGACATTAAGGCATCTACAGAGATGAGGCTGAGAAGATTCCAGTCAGTGGAGAGTGGAGCAAATAATGTAGTCTTCATCAGGACACTTGGGATAGAACCTGAGAAATTGGTGCATCATATTCTCCAAGATATATACAAAACCAAGAAGAAGAAGACTCGGGTTATTCTACGAATGTTACCCATCTCAGGCACATGCAAGGCTTTCTTAGAAGACATGAAAAAATATGCAGAAACATTTTTGGAACCCTGGTTTAAAGCTCCAAACAAAGGGACATTTCAGATTGTATATAAATCTCGAAATAACAGTCACATGAATAGAGAAGAAGTTATCAAAGAATTGGCAGGAATAGTAGGCAGCCTCAATTCGGAAAATAAAGTAGATCTTACCAATCCACAGTACACAGTGGTAGTAGAAATCATTAAAGCTGTCTGTTGCCTGAGTGTTGTGAAAGATTACACGTTGTTCAGAAAATATAATCTCCAGGAAGTGGTGAAGAGTGCCAAGGACTCGTCACAGCTTAACCCAAAGCAGGCAGCGCTAACAGGAAATGGGAAAGAAGCTAAATTGGAATCTGGTGACAAATCAAATCAAAATGACCCAGCAGAAGGAAAAAATAACCAGCAGGTGGTACCAGAGGATAGTGAGGAGCTGGGTCAGACAGAACCAATATCTGAGACACATGAGGTGAGTGAGGGGGCCKCTAAACCTGAACTTGCAAGTCAAGTCACAGAAGGATCTGAGACACATGTGGTGAGTGAGGGGGCC

Related Sequences

bmy_20955T0 Protein

Length: 359 aa      View alignments
>bmy_20955T0
MASPVQQSPQPGGGKRKGKAQYVQAKRARRCDGGGPRQLEPGLQGILITCNMNERKCVEEAYSLLNEYGDDMYGPEKFADKDQQLSGSEGEDDDVEAALKKEVGDIKASTEMRLRRFQSVESGANNVVFIRTLGIEPEKLVHHILQDIYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWFKAPNKGTFQIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLTNPQYTVVVEIIKAVCCLSVVKDYTLFRKYNLQEVVKSAKDSSQLNPKQAALTGNGKEAKLESGDKSNQNDPAEGKNNQQVVPEDSEELGQTEPISETHEVSEGAXKPELASQVTEGSETHVVSEGA