Part of scaffold_2727 (Scaffold)

For more information consult the page for scaffold_2727 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HPSE ENSTTRG00000004885 (Bottlenosed dolphin)

Gene Details

heparanase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004606, Bottlenosed dolphin)

Protein Percentage 83.87%
cDNA percentage 86.09%
Ka/Ks Ratio 0.64036 (Ka = 0.0414, Ks = 0.0647)

HPSE ENSBTAG00000005745 (Cow)

Gene Details

heparanase precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007550, Cow)

Protein Percentage 82.49%
cDNA percentage 89.07%
Ka/Ks Ratio 0.75758 (Ka = 0.1105, Ks = 0.1458)

HPSE  (Minke Whale)

Gene Details

heparanase

External Links

Gene match (Identifier: BACU002008, Minke Whale)

Protein Percentage 97.03%
cDNA percentage 97.6%
Ka/Ks Ratio 0.47154 (Ka = 0.019, Ks = 0.0403)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1494 bp    Location:10056..47084   Strand:+
>bmy_20965
ATGCTGCTGCGCTGGAAGCCCGGGCTGCCGCTGCCGCTGCTGCTGTTCCTGGGGCCGCTGTGTCCCCGCTCCCCCGGCGCCCTGGCGGAACCCGCGCCAGCTGACGACGTCGTGGAGCTGCTTTTCTCCACCGAGCGGCCAGTGCATCTGGTGAGTCCCGCGTTCCTGTCCTTCACCATCGACGCCAATCTGGCCACGGACCCGCGGTTCCTCACCTTCCTGGGTTCTTCAAAGCTTCGCACTTTGGCCAGAGGTTTGTCTCCCGCATACCTGAGATTTGGTGGCACGAAGACAGACTTTCTCATTTTTGATCCCAAGAAGGAACCAACCTTTGAAGAGAGAAGTTACTGGCAATCTCAAGTCAACCAGGATATTTGCGAATCTGGATCCGTCCCTTCTGATGTGGAGAGGAGGTTAAAGTTGGAATGGCCCTTCCAGGAGCAATTGCTACTCAGAGAACAGTATCAGAAAAAGTTCAAGAACAGTACCTACTCAAGAAGCTCAGTGGATATGCTGTATACCTTTGCCAGTTGCTCAGGACTGGACCTGATCTTTGGTCTAAATGCATTACTACGAACTGCAGATTTGCACTGGAACAGTTCCAATGCTCAGTTACTCCTGGACTACTGCTCTTCCAAGAGTTATAACATTTCTTGGGAACTAGGCAATGAACCTAACAGTTTCTGGAAGAAGGCTGGTATTTTCATCGATGGGTTGCAGTTAGGAGAAGATTTTATGGAGTTGCATAAACTTCTACGAAAATCTGCTTTCAAAAATGCAAAACTCTATGGTCCTGATGTTGGCCAGCCTCGAGAAAAGACTGTTAAGATGCTGAAGAGTTTCCTGAAGGCTGGGGGAGAAGTGATTGATTCAGTTACATGGCATCACTACTACTTGAATGGGCGAATTGCTACCAAAGAAGATTTTCTAAACCCTGATGTATTGGACACTTTTATTTCATCTGTGCAAAAAATTTTCCAGGCTGTTGAGGAGACCAGACCCCACAAGAAGGTTTGGTTAGGAGAGACCAGCTCTGCGTATGGGGGTGGAGCGCCCTTGCTGTCCAACACCTTTGCTGCTGGCTTTATGTGGCTGGATAAATTGGGCCTGTCTGCCAGAATGGGCATAGAAGTGGTGATGAGGCAAGTGTTCTTCGGAGCTGGAAACTACCACTTAGTGGATGAAAATTTTGAACCTTTGCCTGTAAGTGACCATTATTTTCCTATTATCAAACTGGTGGGCACCAACGTGTTAATGGCAAGTGTGAAAGGTCCAGACAGAAACAAACTTCGAGTATATCTTCATTGCACAAACATCAACCACCCAAGGTATAAAGAAGGAGATTTAACTCTGTATGCCTTAAACCTCCATAATGTCACCAAGCGCTTGCGGTTACCACATCACTTATTTGACAAGCAAGTGGACAAATACCTCATAAAACCTTCAGGACCCAATGGCTTATTTTCCAATTTTGATTTTAAATTCCAACAGTGA

Related Sequences

bmy_20965T0 Protein

Length: 498 aa      View alignments
>bmy_20965T0
MLLRWKPGLPLPLLLFLGPLCPRSPGALAEPAPADDVVELLFSTERPVHLVSPAFLSFTIDANLATDPRFLTFLGSSKLRTLARGLSPAYLRFGGTKTDFLIFDPKKEPTFEERSYWQSQVNQDICESGSVPSDVERRLKLEWPFQEQLLLREQYQKKFKNSTYSRSSVDMLYTFASCSGLDLIFGLNALLRTADLHWNSSNAQLLLDYCSSKSYNISWELGNEPNSFWKKAGIFIDGLQLGEDFMELHKLLRKSAFKNAKLYGPDVGQPREKTVKMLKSFLKAGGEVIDSVTWHHYYLNGRIATKEDFLNPDVLDTFISSVQKIFQAVEETRPHKKVWLGETSSAYGGGAPLLSNTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFEPLPVSDHYFPIIKLVGTNVLMASVKGPDRNKLRVYLHCTNINHPRYKEGDLTLYALNLHNVTKRLRLPHHLFDKQVDKYLIKPSGPNGLFSNFDFKFQQ*