Part of scaffold_2719 (Scaffold)

For more information consult the page for scaffold_2719 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTU2 ENSTTRG00000006269 (Bottlenosed dolphin)

Gene Details

cytosolic thiouridylase subunit 2 homolog (S. pombe)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005933, Bottlenosed dolphin)

Protein Percentage 89.83%
cDNA percentage 92.21%
Ka/Ks Ratio 0.23306 (Ka = 0.053, Ks = 0.2274)

BT.88215 ENSBTAG00000020943 (Cow)

Gene Details

cytoplasmic tRNA 2-thiolation protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032466, Cow)

Protein Percentage 85.19%
cDNA percentage 87.07%
Ka/Ks Ratio 0.15704 (Ka = 0.08, Ks = 0.5094)

CTU2  (Minke Whale)

Gene Details

cytosolic thiouridylase subunit 2 homolog (S. pombe)

External Links

Gene match (Identifier: BACU019146, Minke Whale)

Protein Percentage 94.46%
cDNA percentage 96.0%
Ka/Ks Ratio 0.31882 (Ka = 0.0299, Ks = 0.0938)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1398 bp    Location:84287..76210   Strand:-
>bmy_20971
ATGTGCGAGGTGGGCGAGGACTATCGGGCGCCCGCGGGGCAGCCGCCGCCACGGCCCGGCCGTGAGCAGAAGTGTGTGAAGTGCAAGGAAGGCCTGCCTGTCGTGGTGATCCGAGCCGGAGATGCTTTCTGCAGGGACTGTTTCAAGGCGTTTTACGTCCACAAGTTCAGAGCCGTGCTTGGAAAGAACCGGCTGATCTTCCCGGGGGAGAAGGGCCTGAGTCGAGATTCTGCCAAGAGACTGCGTTTCGTGCCAGGGGTTGTCTACGCCGATGAGGGAGCAGCCTGTGGCCAGAGCCCGGAGGACAGAGCAAAAACCCTGGCCGAGGCGAGGCTGGTCCTGCAGACCGTCGGCTTCCCATGGCACATTGTTGCCTTGGAAGAGCCGGTGGGGACCGAGGGAGCCTACAAGGCGGCCGTGGACAGTTTCCTGCAGCAGCAGCACGCCCTGGGGGGGGAGCAGCAGAGCCAGCCCTGCCCCCAGCGCCCCCCGAGCCGGGCTGGGCCACCCACAGCCGGCCAGACTGAGGCTCTGTCCACACTGTTCAACTCAGTGGAGACGCTGACAGCCAAGGAGGAGCTTCTGCAGACACTGCGGACCCACTTGATCCTGCACGTAGCCCGGACCCACGGCTACTCCAAGGTGATGATGGGGGACAGCTGCACCCGCCTGGCCATCAAGCTCATGACCAGCCTGGCACTGGGGAGAGGGGCCTTCCTCGCCTGGGACACGGGCTTCTCAGACGAGCGACACGGCGACGTGGTGGTGGTGCGGCCCATGCGCGAGCACACGCTTAAGGAGGTCGCCTTCTACAACCGCCTGTTTGCCGTCCCCTCCGTCTTCACGCCGGCCGTTGACACCAAGGCCCCCGAAAAGGCCAGCATCCACCGGCTGATGGAGGCCTTCATCCTCAGGCTGCAGGCCCAGTTCCCCTCCACGGTCAGCACCGTGTACAGAACGAGCGAGAAACTGGTCAAGGCGCCCAGGGATGGCTGTGCTGCCGGCACCCCCGGCCCCCGCTGCCTGCTGTGTATGTGCGTGCTGGATGTCGACACTGCTGACAGTGCCACAGCTTTTGGGGCTCAGACCTCCTCGCAGCTCCCCCAGACGCAGCCCCCCGTCGCACAGGCTGAGGCGCCCACCGTGTCCTGCTGCTGCACTGGGATGGGCGGGGCCCGGCCCTGCTGCAGGACGGAGGAGGACCCCCGGGCCCGTGTGATTGAGCAGCTGTGCTACGGCTGCCGTGTGAACATGAAGGACTTGCCCTCCCTGGACCCCCTGCCACCCTACATCCTGGCCGAGGCCCAGCTCCGCAGCCGGAGGGCCGAGGCTGAGCAGATCCAGGAGTATCTACTGGAGGACCGTGAGGACGAGGACGCACGGCCTGGCGAGAGCTGA

Related Sequences

bmy_20971T0 Protein

Length: 466 aa      View alignments
>bmy_20971T0
MCEVGEDYRAPAGQPPPRPGREQKCVKCKEGLPVVVIRAGDAFCRDCFKAFYVHKFRAVLGKNRLIFPGEKGLSRDSAKRLRFVPGVVYADEGAACGQSPEDRAKTLAEARLVLQTVGFPWHIVALEEPVGTEGAYKAAVDSFLQQQHALGGEQQSQPCPQRPPSRAGPPTAGQTEALSTLFNSVETLTAKEELLQTLRTHLILHVARTHGYSKVMMGDSCTRLAIKLMTSLALGRGAFLAWDTGFSDERHGDVVVVRPMREHTLKEVAFYNRLFAVPSVFTPAVDTKAPEKASIHRLMEAFILRLQAQFPSTVSTVYRTSEKLVKAPRDGCAAGTPGPRCLLCMCVLDVDTADSATAFGAQTSSQLPQTQPPVAQAEAPTVSCCCTGMGGARPCCRTEEDPRARVIEQLCYGCRVNMKDLPSLDPLPPYILAEAQLRSRRAEAEQIQEYLLEDREDEDARPGES*