Part of scaffold_2719 (Scaffold)

For more information consult the page for scaffold_2719 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RNF166 ENSTTRG00000006266 (Bottlenosed dolphin)

Gene Details

ring finger protein 166

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005926, Bottlenosed dolphin)

Protein Percentage 82.28%
cDNA percentage 82.14%
Ka/Ks Ratio 0.049 (Ka = 0.0077, Ks = 0.1572)

RNF166 ENSBTAG00000020942 (Cow)

Gene Details

RING finger protein 166

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027892, Cow)

Protein Percentage 96.62%
cDNA percentage 94.09%
Ka/Ks Ratio 0.02561 (Ka = 0.0149, Ks = 0.5819)

RNF166  (Minke Whale)

Gene Details

ring finger protein 166

External Links

Gene match (Identifier: BACU004286, Minke Whale)

Protein Percentage 83.76%
cDNA percentage 86.32%
Ka/Ks Ratio 0.21163 (Ka = 0.1083, Ks = 0.5117)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 771 bp    Location:84244..93663   Strand:+
>bmy_20972
ATGGCTGCTCCGTGTCGCGTTGCACGCGGCGGCGGCGGCGGCGGGCCGGGCCCCGGCATGGCGATGTTCCGCAGCCTGGTGGCCTCGGCTCAACAGCGGCAGCCGCCGGGCGGGCCCGCGGGCGGCGACAGCGGCCTGGAGGCGCAGTACAGCTGCCCCATCTGCCTGGAAGTCTACCATCGGCCCGTGGCCATCGGCAGCTGCGGACACACGTTCTGCGGGGAGTGCCTCCAGCCGTGCCTGCAGGTGCCGTCCCCCCTGTGCCCACTGTGCCGCCTGCCCTTCGACCCCAAGAAAGTGGACAAGGCCGCCCACGTGGAGAAGCAGCTTTCGTCCTACAAGGCACCCTGCCGGGGCTGCAGTAAGAAGGTGACGCTGGCCAAGATGAGGGTGCACGTTGCCTCCTGCGTGAAGGTCCAGGAGCAGATGGCCAACTGTCCCAAGTTCGTCCCCGTGGTGCCCACGTCCCAGCCCATCCCCAGCGCCGTCCCCAACAGGTCCACCTTCGCCTGCCCTTACTGTGGTGCCCGCAACCTGGACCAGCAGGAGCTGGTGAAGCACTGCGTGGACGGCCACCGTGGCGACCCCAACCGCGTGGTGTGTCCCATCTGCGCGGCCATGCCCTGGGGCGACCCGAGCTACAAGAGCGCCAACTTTCTGCAGCACCTGCTCCACCGGCACAAGTTCTCCTACGACACCTTCGTGGACTACAGCATCGACGAGGAGGCCGCCTTCCAGGCCGCCCTGGCCCTGTCTCTCTCCGAGAACTGA

Related Sequences

bmy_20972T0 Protein

Length: 257 aa      View alignments
>bmy_20972T0
MAAPCRVARGGGGGGPGPGMAMFRSLVASAQQRQPPGGPAGGDSGLEAQYSCPICLEVYHRPVAIGSCGHTFCGECLQPCLQVPSPLCPLCRLPFDPKKVDKAAHVEKQLSSYKAPCRGCSKKVTLAKMRVHVASCVKVQEQMANCPKFVPVVPTSQPIPSAVPNRSTFACPYCGARNLDQQELVKHCVDGHRGDPNRVVCPICAAMPWGDPSYKSANFLQHLLHRHKFSYDTFVDYSIDEEAAFQAALALSLSEN*