Part of scaffold_2719 (Scaffold)

For more information consult the page for scaffold_2719 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNAI3 ENSTTRG00000006262 (Bottlenosed dolphin)

Gene Details

snail family zinc finger 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005920, Bottlenosed dolphin)

Protein Percentage 96.11%
cDNA percentage 96.23%
Ka/Ks Ratio 0.121 (Ka = 0.0187, Ks = 0.1545)

SNAI3 ENSBTAG00000017528 (Cow)

Gene Details

zinc finger protein SNAI3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023305, Cow)

Protein Percentage 89.44%
cDNA percentage 91.67%
Ka/Ks Ratio 0.15032 (Ka = 0.0499, Ks = 0.3317)

SNAI3  (Minke Whale)

Gene Details

snail family zinc finger 3

External Links

Gene match (Identifier: BACU004288, Minke Whale)

Protein Percentage 98.55%
cDNA percentage 97.58%
Ka/Ks Ratio 0.0446 (Ka = 0.0059, Ks = 0.1313)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 855 bp    Location:100086..105707   Strand:+
>bmy_20973
ATGCCGCGCTCCTTCCTGGTGAAGACGCACTCCAGCCACAGGGTCCCCAACTACGGGCAGCTGGAGAGGCAGAGAGAAACCAATGGCGCCTGTTCTGCCTGCGGGGGGCTGGTGGTGCCCCTCGTCCTCCCAGACAAGGCGGCCCCGTCCACGCCTGGCGACCCTCCCCGGCCCTGGGACTTCACCTCCGTCGTCGCCCACGTCTCCCTGCCCCTCCCCACCTTCCTGTGTAACGAGGAAGCTCGGGGGGCCTCGGGGCCAGACCCCTTGGAAGTCAGCCTGGCGGACCCTCGGGCTCGCCGGGCCCCCGGCGCACCTCTCAGAGACAGCCTGAACCACCTCAACCTGCCCCCGCTGCTGGCTCTGCCCACGCGCTGGCCCCCGATCCTGGGCGCAGATGGGGCCCAGGCTCCGGGCCACCTGCCAGGGGCCGAGCGGGCCCCCCACACCCCAGGGGGCTTTCGCACACCGGCCGCACTGGCCAGGCACCAGCAGCTGCATTGCCACCTGCAGGCTCAGCGCTGTTTCACCTGCAAATTCTGCGACAAGGAGTATGGCAGCCTGGGCGCCCTCAAGATGCACATCCGCACACACACGCTGCCCTGCCTCTGCACCGTGTGCGGCAAGGCCTTCTCCAGGCCCTGGCTGCTCCAGGGCCACATCCGGACCCACACAGGTGAGAAGCCCTACACCTGCCCTCACTGCAGCAGGGCCTTTGCCGACCGCTCCAACCTGAGGGCCCACCTGCAGACGCACTCCGACACCAAGAAGTACCAGTGCAAGCGCTGCGCCAAGACCTTCTCCCGCGTGGCGCTCCTGGCGCGGCACGAGGAGTCTGGCTGCTGCGCCCCCTGA

Related Sequences

bmy_20973T0 Protein

Length: 285 aa      View alignments
>bmy_20973T0
MPRSFLVKTHSSHRVPNYGQLERQRETNGACSACGGLVVPLVLPDKAAPSTPGDPPRPWDFTSVVAHVSLPLPTFLCNEEARGASGPDPLEVSLADPRARRAPGAPLRDSLNHLNLPPLLALPTRWPPILGADGAQAPGHLPGAERAPHTPGGFRTPAALARHQQLHCHLQAQRCFTCKFCDKEYGSLGALKMHIRTHTLPCLCTVCGKAFSRPWLLQGHIRTHTGEKPYTCPHCSRAFADRSNLRAHLQTHSDTKKYQCKRCAKTFSRVALLARHEESGCCAP*