Part of scaffold_2739 (Scaffold)

For more information consult the page for scaffold_2739 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ISOC1 ENSTTRG00000015169 (Bottlenosed dolphin)

Gene Details

isochorismatase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014380, Bottlenosed dolphin)

Protein Percentage 82.68%
cDNA percentage 81.82%
Ka/Ks Ratio 0.05389 (Ka = 0.0026, Ks = 0.0481)

ISOC1 ENSBTAG00000000341 (Cow)

Gene Details

Isochorismatase domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000035516, Cow)

Protein Percentage 99.32%
cDNA percentage 95.72%
Ka/Ks Ratio 0.02293 (Ka = 0.0033, Ks = 0.1446)

ISOC1  (Minke Whale)

Gene Details

isochorismatase domain containing 1

External Links

Gene match (Identifier: BACU013052, Minke Whale)

Protein Percentage 87.12%
cDNA percentage 89.27%
Ka/Ks Ratio 0.84109 (Ka = 0.1099, Ks = 0.1307)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 990 bp    Location:11168..30039   Strand:+
>bmy_21041
ATGGCGGCGGCGGAGCCCGCGGTCACGGCGCTCCCCAGCGGCGGTGGCGCGGGGGCGCCGTCGGGCACGGTCCCCGTGCTCTTCTGCTTCTCGGTCTTCGCGCGGCCCGCAGCCGTGCCGCACGGCGCGGGCTACGAGCTGCTCATCCAGAAGTTCCTCAGTCTGTACGGCGACCAGATCGACATGCACCGCAAATTCGTGGTGCAGCTCTTCGCGGAGGAGTGGGGCCAGTATGTGGACCTGCCCAAGGGCTTCGCGGTGAGCGAGCGCTGCAAGGTGCGCCTCGTGCCGCTGCAGATCCAGCTTAGAGGATTCACCGGAAGATTTATCCTGTTGAAAAGCAAGAACAAAAGGTGTATTTTAGGTACTACACCACCACCATTTTTTTTGGTTGAGAAACCGCTCACTACCCTTGGAAATCTTACACCTTCAAGCACTGTGTTTTTCTGCTGTGATATGCAGGAAAGGTTCAGACCAGCCATCAAGTATTTTGGAGATATTATTAGTGTGGGACAGAGATTGTTACAAGGGGCCCGGATTTTAGGAATTCCAGTTATTGTAACAGAACAGTACCCTAAAGGTCTTGGAAGCACTGTTCAAGAAATTGATTTAACGGGTGTAAAACTGGTACTTCCAAAGACCAAGTTTTCAATGGTATTACCAGAAGTAGAAGCAGCATTAGCAGAGATTCCTGGAGTCAGGAGTGTTGTGTTATTTGGAGTAGAAACCCACGTGTGCATCCAACAGACAGCTCTGGAGCTCGTTGGCAGAGGTATCGAGGTTCATATTGTCGCTGATGCCACGTCGTCGAGAAGCATGATGGACAGGATGTTTGCTCTTGAGCGTCTTGCTCGAACTGGGATCATAGTGACTACAAGTGAAGCTGTTCTGCTACAGCTGGTGGCTGATAAAGACCATCCAAAATTCAAGGAAATTCAGAATYTAATTAAGGCGAGTGCTCCAGAGTCGGGTCTGCTTTCCAAAGTMTAA

Related Sequences

bmy_21041T0 Protein

Length: 330 aa      View alignments
>bmy_21041T0
MAAAEPAVTALPSGGGAGAPSGTVPVLFCFSVFARPAAVPHGAGYELLIQKFLSLYGDQIDMHRKFVVQLFAEEWGQYVDLPKGFAVSERCKVRLVPLQIQLRGFTGRFILLKSKNKRCILGTTPPPFFLVEKPLTTLGNLTPSSTVFFCCDMQERFRPAIKYFGDIISVGQRLLQGARILGIPVIVTEQYPKGLGSTVQEIDLTGVKLVLPKTKFSMVLPEVEAALAEIPGVRSVVLFGVETHVCIQQTALELVGRGIEVHIVADATSSRSMMDRMFALERLARTGIIVTTSEAVLLQLVADKDHPKFKEIQNLIKASAPESGLLSKV*