Sequence details bmy_21083 (Coding sequence)

Part of scaffold_2748 (Scaffold)

For more information consult the page for scaffold_2748 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SAMM50 ENSTTRG00000015330 (Bottlenosed dolphin)

Gene Details

sorting and assembly machinery component 50 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014530, Bottlenosed dolphin)

Protein Percentage 87.76%
cDNA percentage 89.86%
Ka/Ks Ratio 0.43836 (Ka = 0.0843, Ks = 0.1923)

SAMM50 ENSBTAG00000045957 (Cow)

Gene Details

sorting and assembly machinery component 50 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055147, Cow)

Protein Percentage 87.8%
cDNA percentage 84.9%
Ka/Ks Ratio 0.17476 (Ka = 0.0875, Ks = 0.5005)

SAMM50  (Minke Whale)

Gene Details

SAMM50 sorting and assembly machinery component

External Links

Gene match (Identifier: BACU013456, Minke Whale)

Protein Percentage 87.5%
cDNA percentage 88.6%
Ka/Ks Ratio 0.53291 (Ka = 0.1043, Ks = 0.1957)

Genome Location

Sequence Coding sequence

Length: 1008 bp    Location:97412..207973   Strand:+
Raw sequence 
>bmy_21083
ATGGGGACAGTGCACGCCAGGAGTTTGGAGCCTCTTCCAGCCAGTGGACCTGATTTTGGAGCATTAGGAGAAGAAGCTGAATTTGTTGAAGTTGAACCTGAAGCTAAACAGGAAATTCTTGAGAACAAGGATGTAATGAGGAGATCTCACGAAGCCCGTGAGAAATTGCTTCGTCTGGGAATATTTAGACAGGTGGATGTCTTGATCGATACATGTCAAGGTGACAATGCGCTTCCCAACGGGTTAGACGTTACCTTTGAAGTAACTGAATTAAGGAGATTAACGGGCAGTTATAACACCATGGTTGGGAACAACGAAGGCAGCATGGTACTTGGCCTCAAACTCCCTAATCTTCTAGGCCGTGCAGAAAAGGTGACTTTTCAGTTTTCCTATGGAACAAAAGAAACTTCGTATGGCCTGTCCTTCTTCAAACCACAGCCTGGAAACTTCGAAAGAAAGTTTTTTCAGCATCTCTCTGGGGTGGAGTGTTGGTACCCACTGGTGATAAACCGTCAAGTATTGCTGATAGGAGACTACCTGGGCGGAGAAGCATACTGGGCCGGTGGCCTGCACCTGTACACCCCGTTACCTTTCCGACCGGGCCAGGGCGGCTTTGGAGAGCTCTTCAGAACTCACTTCTTCCTCAATGCAGGAAACCTCTGCAACCTCAACTATGGGGAGGGCCCCAGAGCTCACATTCGAAAGCTGGCTGAGTGCATCCGCTGGTCTTACGGCGCCGGGATCGTTCTCAGGCTGGGCAACATCGCGMGGCTGGAGCTGAACTACTGCGTCCCCATGGGCGTGCAGGGTGGGGACAGAACGTCCGGAGACAAGAGAAGACGCTCGTGCTGGATCTCAGCCCAGAGCGAGGCTGAGATGAGTGACCTGCAGGAAGAAGGGAAAAATSCCATCAACTTGCCGATGTCCCCTGCCTCGGTGGAGATCCACCCTGAAGACACCCTGCTCGGTATTATCGGTTTCTCCAGCTCCTTGTCGTGGGCGAGTTGA

Related Sequences

bmy_21083T0 Protein

Length: 336 aa      View alignments
>bmy_21083T0
MGTVHARSLEPLPASGPDFGALGEEAEFVEVEPEAKQEILENKDVMRRSHEAREKLLRLGIFRQVDVLIDTCQGDNALPNGLDVTFEVTELRRLTGSYNTMVGNNEGSMVLGLKLPNLLGRAEKVTFQFSYGTKETSYGLSFFKPQPGNFERKFFQHLSGVECWYPLVINRQVLLIGDYLGGEAYWAGGLHLYTPLPFRPGQGGFGELFRTHFFLNAGNLCNLNYGEGPRAHIRKLAECIRWSYGAGIVLRLGNIARLELNYCVPMGVQGGDRTSGDKRRRSCWISAQSEAEMSDLQEEGKNXINLPMSPASVEIHPEDTLLGIIGFSSSLSWAS*