Sequence detailsbmy_21131 (Coding sequence)

Part of scaffold_2785 (SequenceType object (1))

For more information consult the page for scaffold_2785 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCP1ENSTTRG00000003613 (Bottlenosed dolphin)

Gene Details

lymphocyte cytosolic protein 1 (L-plastin)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003388, Bottlenosed dolphin)

Protein Percentage 93.92%
cDNA percentage 95.56%
Ka/Ks Ratio 0.42477 (Ka = 0.0175, Ks = 0.0412)

BT.49547ENSBTAG00000007079 (Cow)

Gene Details

plastin-2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009308, Cow)

Protein Percentage 97.25%
cDNA percentage 93.59%
Ka/Ks Ratio 0.04953 (Ka = 0.0126, Ks = 0.2548)

Additional orthologs identified in other species via the OPTIC pipeline.

LCP1 (Human)   Lcp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1533 bp    Location:57545..13060   Strand:-
Raw sequence 
>bmy_21131
ATGGCCAGAGGATCAGTATCCGATGAAGAAATGATGGAGCTCAGAGAAGCTTTTGCCAAAGTTGATTCTGATGGCAATGGGTACATCAGCTGCAATGAGCTGAATGATTTGTTCAAGGCTGCCTGCTTGCCTCTGCCTGGGTACAGAGTGAGAGAAATTACAGAAAACCTGATGGCTACAGGTGACCTGGACCAGGATGGGAAGATCAGCTTTGATGAGTTTATCAAGGTTTTTCATGGCCTGAAAAGCACAGAGGTTGCCAAGACCTTTAGAAAAGCAATCAATAAGAAGGAAGGGATTTGTGCGATCGGGGGCACTTCAGAGCAATCTAGTGTTGGGACCCAACACTCCTATTCAGAGGAAGAGAAGTATGCCTTTGTCAACTGGATAAACAAAGCCCTGGAAAATGACCCCGATTGTCGGCATGTCATCCCAATGAATCCAAACACCAATGATCTCTTCAGTGCTGTTGGAGATGGCATTGTCCTTTGTAAAATGATCAACCTATCAGTGCCGGACACAATTGATGAAAGAGCAATCAACAAAAAGAAACTCACCCCTTTCACCATTCAGGAGAATCTGAACCTGGCTCTGAACTCTGCCTCAGCCATCGGCTGCCACGTGGTTAATATCGGGGCTGAGGACTTAAAGGAGGGGAAGCCTTACCTGGTCCTGGGACTGCTGTGGCAGGTCATCAAGATTGGGTTATTTGCCGACATCGAACTCAGCAGAAACGAAGCACTGGCCGCTCTTTTGAGAGAAGGGGAGAGTCTGGAGGATTTGATGAAACTCTCCCCTGAGGAGCTCCTGCTGAGATGGGCTAATTACCACCTGGAAAATTCAGGCTGCAACAAAATCAGCAACTTCAGCAGTGACATCAAGGACTCAAAAGCTTATTACCACCTGCTTGAACAGGTGGCTCCAAAAGGAGATGAAGAAGGTATTCCTGCTGTTGTTATTGACATGTCAGGACTGAGGGAGAAGGATGACATCCAGAGGGCAGAATGCATGTTGCAGCAGGCRGAGAGGCTGGGCTGCCGGCAGTTTGTCACAGCTACAGATGTTGTCCGAGGGAACCCCAAGTTGAACTTGGCTTTTATTGCCAACCTCTTTAACAAATACCCTGCCCTGCACAAACCAGAGAACCAGGACATCGACTGGGGGGCTCTTGAAGAACTTGGAGGTGGGCAGAAGGTCAACGATGACACTATTGTCAACTGGGTGAATGAAACATTAAAGGAAGCGGAGAAAAGTTCATCCATCTCCAGTTTCAAGGACCCAAAGATTAGTACAAGTCTGCCCGTCCTGGATCTCATTGATGCCATTCAACCAGGTTCCATTAACTATGACCTCCTGAAGACAGAAAACCTGAATGATGAAGAGAAACTCAACAATGCAAAGTATGCCATCTCTATGGCCCGGAAAATTGGAGCAAGAGTATATGCCCTTCCAGAAGACTTGGTTGAAGTGAACCCCAAGATGGTCATGACAGTGTTTGCTTGCCTCATGGGGAAAGGAATGAAGAGGGTGTAA

Related Sequences

bmy_21131T0 SequenceType object (3)

Length: 511 aa      View alignments
>bmy_21131T0
MARGSVSDEEMMELREAFAKVDSDGNGYISCNELNDLFKAACLPLPGYRVREITENLMATGDLDQDGKISFDEFIKVFHGLKSTEVAKTFRKAINKKEGICAIGGTSEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFSAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKEGKPYLVLGLLWQVIKIGLFADIELSRNEALAALLREGESLEDLMKLSPEELLLRWANYHLENSGCNKISNFSSDIKDSKAYYHLLEQVAPKGDEEGIPAVVIDMSGLREKDDIQRAECMLQQAERLGCRQFVTATDVVRGNPKLNLAFIANLFNKYPALHKPENQDIDWGALEELGGGQKVNDDTIVNWVNETLKEAEKSSSISSFKDPKISTSLPVLDLIDAIQPGSINYDLLKTENLNDEEKLNNAKYAISMARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGMKRV*