Part of scaffold_2798 (Scaffold)

For more information consult the page for scaffold_2798 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VAT1 ENSTTRG00000011741 (Bottlenosed dolphin)

Gene Details

vesicle amine transport protein 1 homolog (T. californica)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011137, Bottlenosed dolphin)

Protein Percentage 97.0%
cDNA percentage 97.28%
Ka/Ks Ratio 0.18507 (Ka = 0.0145, Ks = 0.0782)

VAT1 ENSBTAG00000007390 (Cow)

Gene Details

synaptic vesicle membrane protein VAT-1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009715, Cow)

Protein Percentage 94.95%
cDNA percentage 94.06%
Ka/Ks Ratio 0.10151 (Ka = 0.0226, Ks = 0.2224)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1131 bp    Location:91136..84196   Strand:-
>bmy_21171
ATGTCCGCCGAGAGAGAGGTAGCCGAGGCGGCCACCGTGGTGGCGGCGGCCGAGGCAGGGGCTGGAGAAGATGCCTCTTCGCAGCTCCCGAAGGCGGAGGCAGCCGGCGACGCCCAGCCACCCGCGGCCTCCGAGGGGCCTGTCGCCCCTTCGCCGCCGCCGCTGCGCTGCCTGGTGCTCACCGGCTTCGGTGGCTACGACAAGGTGAAGTTGCAGACCCGGCCGGCCGCTCCCCCGGCCCCCGGGACCGGCCAGCTGACGCTGCGCGTCAAGGCCTGCGGGCTCAACTTCGCCGACCTTATGGCCCGGCTGGGGCTGTACGATCGGCTGCCGCCGCTGCCACTCACTCCCGGCATGGAGGGCGCGGGCGTGGTGATCGCTGTGGGAGAGGGAGTTAACGACCGCAAGACCTTCCTAATGCCTGAGGCCATGACCTTTGAAGAAGCTGCTGCCTTGCTGGTCAATTATATCACAGCCTACCTGGTCCTCTTTGACTTTGGCAACCTACGGCCTGGCCACAGCGTCTTGGTACACATGGCTGCAGGGGGTGTGGGTATGGCTGCTGTGCAGCTGTGCCGTACAGTAGAGAATGTGACAGTGTTCGGAACGGCCTCAGCCAGCAAGCATGAGGTGCTGAAGGAGAGCGGAGTCACACACCCCATCGACTACCACACGACTGACTACGTAGAGGAGATCAAGAAGATCTCTCCCAAAGGAGTGGACATCGTCCTGGACCCTCTAGGTGGGTCAGATACAGCCAAGTGCTACAACCTCCTCAAACCCATGGGCAAAGTAGTCACTTACGGAATGGCCAACTTGCTAACGGGCCCCAAGCGGAACCTGATGGCCGTGGCACGCACATGGTGGAATCAGTTCAGCGTGACAGCTCTGCAGCTGCTGCCGACCAACCGAGCCGTGTGTGGCTTCCACCTGGGCTACCTGGAGGGCGAGGTGGAGCTGGTCAGCGGTGTGGTGACCCGCCTCGTGGCTCTGTACAACCAGGGCCACATCAAACCGCACATCGACTCCGTGTGGCCCTTCGAGAAGGTGGCGGATGCCATGAGGCAGATGCAGGAGAAGAGGAACGTGGGCAAAGTCCTCCTGGTGCCTGGGCCGGAGAAGGAGAACTAG

Related Sequences

bmy_21171T0 Protein

Length: 377 aa      View alignments
>bmy_21171T0
MSAEREVAEAATVVAAAEAGAGEDASSQLPKAEAAGDAQPPAASEGPVAPSPPPLRCLVLTGFGGYDKVKLQTRPAAPPAPGTGQLTLRVKACGLNFADLMARLGLYDRLPPLPLTPGMEGAGVVIAVGEGVNDRKTFLMPEAMTFEEAAALLVNYITAYLVLFDFGNLRPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEVLKESGVTHPIDYHTTDYVEEIKKISPKGVDIVLDPLGGSDTAKCYNLLKPMGKVVTYGMANLLTGPKRNLMAVARTWWNQFSVTALQLLPTNRAVCGFHLGYLEGEVELVSGVVTRLVALYNQGHIKPHIDSVWPFEKVADAMRQMQEKRNVGKVLLVPGPEKEN*