Sequence detailsbmy_21176 (Coding sequence)

Part of scaffold_2798 (SequenceType object (1))

For more information consult the page for scaffold_2798 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NBR1ENSTTRG00000011744 (Bottlenosed dolphin)

Gene Details

neighbor of BRCA1 gene 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011140, Bottlenosed dolphin)

Protein Percentage 97.63%
cDNA percentage 97.95%
Ka/Ks Ratio 0.35878 (Ka = 0.0145, Ks = 0.0403)

NBR1ENSBTAG00000001632 (Cow)

Gene Details

next to BRCA1 gene 1 protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011617, Cow)

Protein Percentage 92.55%
cDNA percentage 93.58%
Ka/Ks Ratio 0.29692 (Ka = 0.041, Ks = 0.1381)

Additional orthologs identified in other species via the OPTIC pipeline.

NBR1 (Human)   Nbr1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2625 bp    Location:167687..193744   Strand:+
Raw sequence 
>bmy_21176
ATGGAACCACAGGTTACTCTAAATGTGACTTTTAAAAATGAAACTCAAAGCTTTCTAGTTTCTGATCCAGAAAATACAACATGGGCTGATGTGGAAGCTATGGTAAAAGTTTCATTTGATTTGAACACTATTCAAATAAAATACCTGGATGAGGAAAATGAAGAGGTATCCATCAACAGTCAAGGAGAATATGAAGAAGCACTTAAGATGGCAGTTAAGCAGGGAAACCAACTGCAGATGCAAGTCCATGAAGGCTATCGTGTTGTCTACGAAGCCCCACCCCCAGTTGGAGGAGAGAAACGACCAGTTGCAAGGACAGGGAAGAAGCCACTTGCACATTATTCTTCACTGGTGAGAGTCTTGGGATCAGACATGAAGACCCCAGAGGAGCCTGCAGCACAGCAGTTTCCACCTGCTCCATGTGACGCAGACCAGCCTCAAGACAAGCCCCCAGACTGGTTCACAAGCTACCTAGAGACATTCAGAGAGCAAGTGGTTAAAGAAACGGTTGAGAAGCTTGAACAGAAATTACGTGAGAAGCTTATCCTCCAGAATCCATCCTTGGGTTCCCGTCCCTCAGAAGTCTCAATGCCCATTTCAGAGGAAACACTGTTTTTGCCAGAAAACCAGTTCAACTGGCATATTGCTTGCGGCAGCTGCCAAAGGAGGATCGTTGGTGTGCGCTACCAGTGCAGACTCCAGAAACAGGTTGACAAGAACTTTCTTAAAGCAGAAAAGCAAAGGTTGCGAGCTGAGAAGAAACAGCGTAAAGCAGAGGTCAAGGAACTTAAAAAGCAGCTTAAACTCCACAGGAAGATTCATCTGTGGAATTCGATCCATGGGCTCCAGAGCCCCAAGTCTCCTTTGGGCCGACCCGAGAGCCTGCTGCAGTCTAACACCCCAATGCTCCCTTTGCAGCCCTGTGCCTCAGTTATGCCAACCCTCAGTGCAGCATTTGTGGATGAGAATTTGCCTGATGGGACTCACCTCCAGCCAGGAACCAAGTTTATCAAACACTGGAGGATGAAAAATACAGGAAATGTAAAGTGGAGTACGGACACAAAGCTCAAGTTCATGTGGGGAAACCTGACTTTGGCTTCTACAGAAAAGAAGGATGTTTTGGTTCCCTGCCTAAAGGCTGGCCATGTGGGAGTTGTGTCTGTGGAGTTCATTGCCCCAACCCTGGAGGGAACATACACTTCCCATTGGCGTCTTTCTCACAAAGGCCAGCAGTTTGGGCCTCGGGTCTGGTGCAGTATCATAGTGGATCCTTTCCCCTCCACAGAGAGCCCTGATAATGCTGAAAAGAGCATGATCAGCTCAAGCAAAGGTGATGATCTCACCTGCCAGCAAGAGGAAGCTCTTCTTCCGGCTAAAGAAGAAATTCCACCTRGTGAAACACCTGAGCAGACAGAAGGGACAGGAACCTGCATCCCACAGAAGGCCAAAAATGCTGCCAGCGAGAGGGAGCTCTACATCCCATCTGTGGATCTTCTGACTGCCCAGGACCTGCTGTCCTTTGAGCTGTTGGATATAAATATTGTCCAAGAGTTGGAGAGAGTGCCCCACAACACCCCTGTGGATATGACTCCCTGCATGTCTCCTCTGCCACATGACAGTCCTTTAATAGAGAAGCCAGGCTTGGGGCAGATACAGGAAGAGAGTGAAGGGGCGGGATTTAAAGAACTTCCTGGGGCAGAATTTCAGTTGTATGCCACAGAGGAACAGCAGCCAGTTGTACTGCCTGGATTCTGCAGTAAGAAGTCTTCTTTGAAATTTGCCTCACCCAAAGAGGGACCACTTGGAGACGAGAGGGAAGAGATTGTCCGTATTGTTGAAGAAGAAGCTGTCGTGGAGGAGGAGGAGGATGAGCTCAAAGATGAAGTTCAGAGTCAGTCCTCTGCTTCTTCGGAGGATTACATCATCATCCTGCCCGAGTGCTTTGACACCAGCCGCCCCCTGGGGGACTCCATGTACAGCTCTGCCCTCTCACAGCCAGGCCTGGAGCGAGGGGCTGAAGGCGAGCCTGGGGTTGAGGCTGGGCAGGAACCAGTCGAGGCTGGGGAGAGACCCCCTGGAGGGGAGAACCAGCCACAGGGGCACAGCATCAATGACATCCTTATGACCTCACAGACTCTGGACACAGTGCCCCTGACCCCAGAGGTGGTAGGGCCTCCGCCACGGCTGCCCAGGAGTCCTCCGTATGCACAGCATCATGGTTCCCTAGGAGTGGATTTACCAGTTACCGTACCAGAAGTTTCTTCAGTCCCTGATCAGAGCAGAGGAGAGCTCAGAGGCTCATCAGGACTTGTAAACAGCAGACAGAAGAGCTATGACCACTCAAGGCACCACCACGGGAGCAGCATTGCTGGAGGGCTGGTGAAGGGGGCTTTGTCTGTTGCCGCCTCTGCATACAAGGCCTTGTTTGCTGGACCACCAGTCACTGCACAGCCAATAGTTTCCGAAGATCAGACAGCAGCCCTGATGTCCCATCTCTTTGAAATGGGATTCTGTGACAGGCAGCTAAACCTAAGGCTGCTGAAGAAACACAATTACAACATCCTGCAGGTTGTGACAGAACTCCTTCAGATCAACAACAACGACTGGTATAGCCACCGCTACTGA

Related Sequences

bmy_21176T0 SequenceType object (3)

Length: 875 aa      View alignments
>bmy_21176T0
MEPQVTLNVTFKNETQSFLVSDPENTTWADVEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEALKMAVKQGNQLQMQVHEGYRVVYEAPPPVGGEKRPVARTGKKPLAHYSSLVRVLGSDMKTPEEPAAQQFPPAPCDADQPQDKPPDWFTSYLETFREQVVKETVEKLEQKLREKLILQNPSLGSRPSEVSMPISEETLFLPENQFNWHIACGSCQRRIVGVRYQCRLQKQVDKNFLKAEKQRLRAEKKQRKAEVKELKKQLKLHRKIHLWNSIHGLQSPKSPLGRPESLLQSNTPMLPLQPCASVMPTLSAAFVDENLPDGTHLQPGTKFIKHWRMKNTGNVKWSTDTKLKFMWGNLTLASTEKKDVLVPCLKAGHVGVVSVEFIAPTLEGTYTSHWRLSHKGQQFGPRVWCSIIVDPFPSTESPDNAEKSMISSSKGDDLTCQQEEALLPAKEEIPPXETPEQTEGTGTCIPQKAKNAASERELYIPSVDLLTAQDLLSFELLDINIVQELERVPHNTPVDMTPCMSPLPHDSPLIEKPGLGQIQEESEGAGFKELPGAEFQLYATEEQQPVVLPGFCSKKSSLKFASPKEGPLGDEREEIVRIVEEEAVVEEEEDELKDEVQSQSSASSEDYIIILPECFDTSRPLGDSMYSSALSQPGLERGAEGEPGVEAGQEPVEAGERPPGGENQPQGHSINDILMTSQTLDTVPLTPEVVGPPPRLPRSPPYAQHHGSLGVDLPVTVPEVSSVPDQSRGELRGSSGLVNSRQKSYDHSRHHHGSSIAGGLVKGALSVAASAYKALFAGPPVTAQPIVSEDQTAALMSHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQINNNDWYSHRY*