Sequence detailsbmy_21177 (Coding sequence)

Part of scaffold_2798 (SequenceType object (1))

For more information consult the page for scaffold_2798 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM106AENSBTAG00000006801 (Cow)

Gene Details

Transmembrane protein 106A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008944, Cow)

Protein Percentage 67.82%
cDNA percentage 74.97%
Ka/Ks Ratio 0.46108 (Ka = 0.2584, Ks = 0.5605)

Additional orthologs identified in other species via the OPTIC pipeline.

TMEM106A (Human)   Tmem106a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1080 bp    Location:195176..199668   Strand:+
Raw sequence 
>bmy_21177
ATGGGTGAGACATTCTCCCAGCTGGGCTCTCGGGAGGATGAGAACAAGTCGATCCTGTCCCCCGACCCAGCCTTTGGCAGCAAGGCTGCCAGCTACTCCAGCACCACCAGCAGCAAGCCTTTTTGTTCCTGTGTGCCTTGTGAAAGGGCTGCTGGTGTCAGCTTTGTGACTTGTCCCACCTGCCAGGGCAGTGGGGAGATCCCTCGAGAGATGGCAAAGCTGAGCTGCCAACAGCCCAGTATTCCCAGTCCTGCTCTGAGGCAGAGGTGGCATGCTTCTGACACTGCTCTGTGGGATGGAGGGGTGCTTCTGGCAGGCTGGCACAGGAAACATTTGTCATGGACACTTGTTGGCCCTCCCTCTCACCCTCTTTCTACAGAACTAGAGAAGCAGCTGGTGGCCCTCATCCCCTATGGGGACCAGAGGCTGAAGCCCAGGCACACGAAGCTCTTCGTGTTCCTGGCAGTGTTCATCTGCCTGGTGACCTCCTCCCTCATCGTCTTTTTCCTGTTTCCCCGGACTATCGCCGTGCAGCCTGTAGGCCTCAACTCCTCCACGGTGACTGTTGACGAGGCCGATATCCACCTCAATATAACGAATATCCTGAGCATCTCCAATAACAACTACTACCCCATCGCTGTGACCCAGCTGACCATTGAGGTTCTGCACCTGTCCCTCGTGGTGGGGCAGGTCTCCAACCGCCTTCTCCTCCGCATCGGCCCTTTGGCCAGTGAGCAGCAAGATCTGTACCTGGCTGAAAATCAAAGTCCACCACGTGCTTCTGCACATCCAGTAAGTAGGGCTTGGAGCCCTGGTACCCCTCTCCCACTTCTGCCCCACCCCCGTGGGAGGAGAGTCATCGCAGCGAATCCCGGGCACCCTGACCTGTTCCTACCTGAGCCGTTCAGAGCAGCTGGTCTTCCAGAGCTACGAATATGTGGACTGCCGGGGAAACACATCCAAGCCCCACTTGCTGGTCCCTCGCCCGCCGTGACCTGTCTGCTGTCGTCGAGCTCCGGCCACCTGCCGGCCTGGTCTGTATCTCCCACCACTCCGTGGCACCCAACAGGACGAGAGTGA

Related Sequences

bmy_21177T0 SequenceType object (3)

Length: 360 aa      View alignments
>bmy_21177T0
MGETFSQLGSREDENKSILSPDPAFGSKAASYSSTTSSKPFCSCVPCERAAGVSFVTCPTCQGSGEIPREMAKLSCQQPSIPSPALRQRWHASDTALWDGGVLLAGWHRKHLSWTLVGPPSHPLSTELEKQLVALIPYGDQRLKPRHTKLFVFLAVFICLVTSSLIVFFLFPRTIAVQPVGLNSSTVTVDEADIHLNITNILSISNNNYYPIAVTQLTIEVLHLSLVVGQVSNRLLLRIGPLASEQQDLYLAENQSPPRASAHPVSRAWSPGTPLPLLPHPRGRRVIAANPGHPDLFLPEPFRAAGLPELRICGLPGKHIQAPLAGPSPAVTCLLSSSSGHLPAWSVSPTTPWHPTGRE*