Part of scaffold_2818 (Scaffold)

For more information consult the page for scaffold_2818 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFIT5 ENSTTRG00000015421 (Bottlenosed dolphin)

Gene Details

interferon-induced protein with tetratricopeptide repeats 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014612, Bottlenosed dolphin)

Protein Percentage 98.34%
cDNA percentage 98.55%
Ka/Ks Ratio 0.2257 (Ka = 0.0069, Ks = 0.0304)

IFIT5 ENSBTAG00000017367 (Cow)

Gene Details

interferon-induced protein with tetratricopeptide repeats 5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023090, Cow)

Protein Percentage 95.23%
cDNA percentage 94.54%
Ka/Ks Ratio 0.12564 (Ka = 0.0211, Ks = 0.1681)

IFIT5  (Minke Whale)

Gene Details

interferon-induced protein with tetratricopeptide repeats 5

External Links

Gene match (Identifier: BACU007884, Minke Whale)

Protein Percentage 99.38%
cDNA percentage 99.03%
Ka/Ks Ratio 0.08217 (Ka = 0.002, Ks = 0.0242)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1626 bp    Location:203855..192199   Strand:-
>bmy_21183
CCGCTCGGGTCCCGCCTTGAACAAAGCGGCCGCCCGCGCGCGCGGACTAGCGCTGCGGTCATCTTGCTCGCGCGCGCGCACACGCACGCGGCCGCTCAGTCCGCGCAGCAGCCGAGCGCTGAGGAGAGAAGCGGAGAGGAGCGGCGCCTCCCAAGACGGCCGCAGAGCCGAGCCACCATGAGTGAAATTCCTAAGGACTCATTGAAGGCCATTCTGTTGGAGTTAGAATGTCACTTCACATGGAATTTACTTAAGGAAGACATTGATCTGTYTGATGTAGAAGATACAATTGGGCAACAGCTTGAATTTCTTACCACAAAATCCAGACTCACTCTTTATAACCTGTTGGCCTATGTGAAACACCTAAAGGGCCAAAATAAAGATGCTCTAGAGTGCTTGAAACAAGCAGAAGAAATAATACAGCGAGAACACTCGGACAAAGAAGAAGTACGAAGTCTGGTCACTTGGGGAAACTACGCCTGGGTTTATTATCACATGGACGAGCTTAAAGAAGCTCAGAAGTATATAGACAAGGTAGGGAACGTCTGCAAGAAATTGTCCAGTCCTTCTGACTACAAGTTGGAACGTCCAGAGATCGACTGTGAGAAAGGGTGGGCACTCTTGAAATTTGGAGGAAAGTATTACCAAAAGGCTAAAGCAGCTTTTGAGAAGGCTCTGGAAGCAGAACCAGACAATCCAGAATTTAACATTGGCTATGCCATCACAGTGTATCGGCTGGATGATTCTGACAGAGAAGGGCCTATAAAGAGCTTTTCTCTGGGCCCCCTGCGGAAAGCTGTTACCCTGAACCCAGATAATTCCTATATTAAGGTYTTTCTGGCGCTGAAGCTTCAAGATGTACATGCAGAAGCTGAAGGGGAAAAGTATATTGAAGAAATCCTGGACCAAATATCATCCCAACCTTACGTTCTTCGTTATGCAGCCAAATTCTATAGGAGAAAAAATTCCTGGGACAAAGCTCTTGAACTTTTGAAAAAGGCCTTAGAGGCGACACCAACCTCCTCTTTCCTGCATCACCAAATGGGACTTTGCTATAGGGCACAAATGATCCAAATCAAGAAGGCCACTCGCAACAGACCTAAAGGAAAGGATAAACTGAAAGTTGATGAGCTGATTACAACAGCTATATTTCATTTCAAAGAAGCTGTGGAGCGAGATTCTATGTTTGCATTTGCCTACACGGACCTGGCCAACATGTATGCTGAGGGAGGCCAGTACAGCAATGCTGAAGACATTTTTCAGAAAGCTCTTCGTCTGGAGAACATAACTGATGATCACAAACATCAGATCCACTACCACTATGGCCGCTTTCAGGAATTTCACTGTAAATCAGAAAATACTGCCATCCACCATTATTTAGAAGCCTTAAAGGTCAAAGACAGGTCATCTCTGCGTACTAAACTGACAAGTGCTCTAAAGAAATTGGCTACCAAGAGACTTGGTCACAATGCTTCAGATGTGCAGAGTTTAAGTGCCCTAGGGTTTGTTTACAAGCTGGAGGGAGAAAAGAGGCAAGCTGCTGAGTACTATGAAAGGGCCCAAAAGATAGATCCAGAAAATGCAGAATTTCTTACTGCTCTCTGTGAGCTTCGACTTTCCATTTAA

Related Sequences

bmy_21183T0 Protein

Length: 542 aa      View alignments
>bmy_21183T0
PLGSRLEQSGRPRARTSAAVILLARAHTHAAAQSAQQPSAEERSGEERRLPRRPQSRATMSEIPKDSLKAILLELECHFTWNLLKEDIDLXDVEDTIGQQLEFLTTKSRLTLYNLLAYVKHLKGQNKDALECLKQAEEIIQREHSDKEEVRSLVTWGNYAWVYYHMDELKEAQKYIDKVGNVCKKLSSPSDYKLERPEIDCEKGWALLKFGGKYYQKAKAAFEKALEAEPDNPEFNIGYAITVYRLDDSDREGPIKSFSLGPLRKAVTLNPDNSYIKVFLALKLQDVHAEAEGEKYIEEILDQISSQPYVLRYAAKFYRRKNSWDKALELLKKALEATPTSSFLHHQMGLCYRAQMIQIKKATRNRPKGKDKLKVDELITTAIFHFKEAVERDSMFAFAYTDLANMYAEGGQYSNAEDIFQKALRLENITDDHKHQIHYHYGRFQEFHCKSENTAIHHYLEALKVKDRSSLRTKLTSALKKLATKRLGHNASDVQSLSALGFVYKLEGEKRQAAEYYERAQKIDPENAEFLTALCELRLSI*