Part of scaffold_2833 (Scaffold)

For more information consult the page for scaffold_2833 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAPPC10 ENSTTRG00000006691 (Bottlenosed dolphin)

Gene Details

trafficking protein particle complex 10

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006355, Bottlenosed dolphin)

Protein Percentage 89.21%
cDNA percentage 88.99%
Ka/Ks Ratio 0.16746 (Ka = 0.0141, Ks = 0.084)

TRAPPC10 ENSBTAG00000007100 (Cow)

Gene Details

trafficking protein particle complex subunit 10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009338, Cow)

Protein Percentage 92.59%
cDNA percentage 90.09%
Ka/Ks Ratio 0.10825 (Ka = 0.0387, Ks = 0.3573)

TRAPPC10  (Minke Whale)

Gene Details

trafficking protein particle complex 10

External Links

Gene match (Identifier: BACU004370, Minke Whale)

Protein Percentage 97.67%
cDNA percentage 98.03%
Ka/Ks Ratio 0.25589 (Ka = 0.0114, Ks = 0.0444)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3666 bp    Location:1739..63548   Strand:+
>bmy_21205
ATGGAATGGAGAAGGTCCTATGGCCGAGCTCCAAAGATGATTCACCTAGAATCTAACTTTGTTCAATTCAAAGAGGAGCTGCTGCCCAAAGAAGGAAACAAAGCTCTGCTCACGTTCCCCTTTCTTCATATTTATTGGACGGAATGCTGTGATACTGAAGTGTATAAAGCTACAGTAAAAGACGACCTCACCAAGTGGCAGAATGTTCTGAAAGCTCATAGCTCCGTGGACTGGTTAATAGTGGTAGTTGAAAATGATGCCAAGAAAAAAAACAAAACCAACATCCTTCCCCGAACTTCTATTGTGGACAAAATAAGAAACGATTTTTGTAATAAACAGAGTGACAGGTGTGTCGTGCTCTCCGACCCCTTGAAGGACTCCTCCCGGACTCAGGAATCCTGGAATGCTTTCCTGACCAAACTCAGGACATTGCTTCTTATGTCTTTTACCAAAAACCTAGGCAAGTTTGAGGATGACATGAGAACCTTGAGGGAGAAGAGGACTGAGCCAGGCTGGAGCTTCTGTGACTATTTCATGGTGCAGGAGGAACTTGCCTTTGTTTTTGAGATGCTACAGCAGTTTGAAGATGCCCTGGTGCAGTACGATGAACTGGACGCTCTGTTTTCTCAGTATGTTGTCAACTTTGGTGCTGGGGATGGTGCCAACTGGCTGACTTTTTTCTGCCAGCCGGTGAAGAGCTGGAATGGATTGATCCTCCGAAAGCCCATAGATATGGAGAAGCGCGGATTGATACAGAGGCAAGAAGCCACCCTGTTAGATCTGCGCAGTTACCTGTTCTCTCGCCAGTGCACCCTGCTCCTCTTCCTGCAGAGGCCGTGGGAGGTGGCTCAGCGCGCCCTAGAGCTGCTGCACAGCTGTGTGCAGGAGCTGAAGCTCTTGGAAGTCTCCGTGCCACCCGGTGCCCTGGATTGCTGGGTGTTCCTGAGCTGCTTGGAGGTGCTGCAGAGGATAGAAGGGTGTTGCGACCGGGCACAGATAGACTCAAACATCGCCCACACCGTGGGTCTGTGGAGCTACGCCACAGAGAAGCTAAAGTCCTTGGGCTATCTGTGTGGACTTGTGTCAGAGCAGGGACCTAACTCAGAAGACCTCAACAGGACGGTTGATCTTTTGGCGGGCTTGGGAGCTGAACGGCCTGAAACAGCCAACACTGCTCAGAGTCCGTATAAGAAGCTCAAAGAAGCGTTATCATCAGTAGAAGCTTTTGAAAAACACTACTTAGACTTGTCCCATGCCACCATTGAAATGTATACGAGTATTGGGAGAATTCGATCCGCTAAGTTCGTTGGAAAGGATCTGGCGGAGTTTTACATACATCTCACGTGTAGTAAGAGGAGGAAGAAGTCTCCCCAGAAGGCAGAAATCTATCTTCAAGGAGCCTTGAAGAATTACCTGGCTGAGGGCTGGGCACTGCCTATCACACACACAAGGAAGCAACTAGCTGAATGTCAGAAACACCTTGGACAAATTGAAAACTACCTTCAGACCAGCAGCCTCCTGGCCAGCGAGCGGCACCTGACTGAGAGCGAGCGGGAGTATTTCTGCAGAGAGATTCTCAGCTTCGCCAAGCGGCAGGCAGACAGCCCAGGTCACAAAATAGTACTCCCTATGCATTCTTTTGCACAACTGAGAGATCTCCATTTTACCCCTTCCAATGCCGTGGTCCATGTGGGTGGTGTCTTGTCGGTGGAGATAACCGTGTGCAGTCAGATGCCCGTGCCTGTCCACGTGGAGCAGATTGCCATCAACGTCCACTTCAGCATCGAGAAAAACAACTACCGGAAGACTGCCGAGTGGCTCACCAAGCACAAGACGGCCAACGGGATTGTCAGCTTCCCGGCAGAGACCGCGCCTTTCCCCACATCCCAGAACAGCCTGCCCGCGCTGGAGCTATGCGAGATGTTCGAAAGAAGTCCTTCTGACAATTCCTTGCACACAACAGGGATTATCTGCAAAAACGTCCACATGCTCCTAAGGAAGCAGGAGAGCGGCGCGTCCCTGGAAGCGCCCTCGGGTGCCGCTCTGGAGGCTGGGGCCCACGTGCTGAAGTGCACCGCTGTGACCCTGGAGCCAGGGCCCAACACGATCACGTTCAGGACGCAGGCCAGGGAGCCGGGAACCTACACGCTGCGGCAGCTATGCGCCTCGGTGGGCCCGGTGTGGTTCGTCCTTCCTCACATCTACCCGCTGGTGCAGTACGAAGTGTATTCGCAGGAGCCACAGCTGCACGTGGAGCCGCTGGCCGATAGCCTTTTGGCTGGTATTCCTCAGAAGGTCAAGTTCACCGTCACTACTGGCCATTACACAGTAAAACACGGGGACAGCCTTCAGCTCAGCAATGTGGAAGCCATGCTTATCCTGTGTCATGAAGAGAGCAGAGCGGTGATCTATTCCAACATGAGAGAAAAGGCTTCTGACGCTCCGCTCCGGGTTCAGTCGTCCGACAAGGTCACGAGCATCAGCCTGCCGGCTGCGCCTGCATACCACATGATCGAATTTGAACTGGAAGTTCTCTCTTTACCTTCAGCTCCAGCAACTGGAGGGGAGAGCACCATGCTGGGGATGACAGAGCCCCATGGGAAGCATAAGGACACACACAAAGCTGGCCACTGCATGGCTACCATGGACCACAAAGTGTCCATCGATTGCCCGTGGTCCATCTACTCCACTGTCATCGCTCTGACGTTCAGCATGCCCTTCGGGACCACGCACTCCCTGTTGTCATCCGGGACACGGAAATATGTTCAAGTGTGTGTCCAGAATTTGTCAGAACTTGACTTTCAGCTGTCAGATAGTCATCTTGTGGATACTGGTGATAGTACCGACCTGCGACTAATACCGCTGAACACAGAATCCGAACAGCGCATCCACAGCAAGCAGGCGGTGTTCTTTGTCTGGGAGCTGAAGTGGACGCAGGAGCCTCCCCCCTCCCTGCACTGCCGGTTCTCCGTTGGATTCTCCCCAGCTTCTGAGGAGCGGCTGTCTGTCTCCTTAAAGCCCTATACTTATGAATTTCAAGTGGACAATTTTTTGACCTTGTACAGTGTGAGAGCGGAGATCTCGCCCCCTCCAGGGACGGAGCTCTGTAAGACAGGCTCTCTCTGCTCCTTGGAGGTGTCCATCACGCGGCTCTCGGACCTCTCGGAGGCGGACAAGGACGAGGCGCTGACAGAGTGCGCCGAGTATTTTTCAACGAAGCTTATGTATGAAGTTGTCGACAACAGCAGCAATTGGGCAGTGTGCGGGAAGAGTTCCGGGGTCATCTCCATGCCTGTGGCTGCTCGGGCCACTCACAGAGTCCACATGGAGGTGATGCCCCTCTTTGCGGGTTACCTGCCCCTCCCCGACGTCAGGCTGTTTAAATACCTGCCCCATCACTCTGCGCACTCGTCACAACTGGATGCTGATAGCTGGATAGAAAACGACAGCCTCTCGGTGGACAAGCCCGTGGACGACCAGTTGGACAGCGGCAGCGTCCAGAGCAGGGGCAGCACGCGCTCGGCGGCCAGCAGCGAGCACAAGGGCCTGCCCATGCCCCGGCTCCGCGCGCTGCCCCCCGGCCAGGCCTTCAGCGCCAGCGCGGGCACGCAGGTCCTGGTCGTCCCCAGCCGGGACGACCACGTTCTCGAAGTCAGCGTCACGTGA

Related Sequences

bmy_21205T0 Protein

Length: 1222 aa      View alignments
>bmy_21205T0
MEWRRSYGRAPKMIHLESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKATVKDDLTKWQNVLKAHSSVDWLIVVVENDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRTQESWNAFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDALVQYDELDALFSQYVVNFGAGDGANWLTFFCQPVKSWNGLILRKPIDMEKRGLIQRQEATLLDLRSYLFSRQCTLLLFLQRPWEVAQRALELLHSCVQELKLLEVSVPPGALDCWVFLSCLEVLQRIEGCCDRAQIDSNIAHTVGLWSYATEKLKSLGYLCGLVSEQGPNSEDLNRTVDLLAGLGAERPETANTAQSPYKKLKEALSSVEAFEKHYLDLSHATIEMYTSIGRIRSAKFVGKDLAEFYIHLTCSKRRKKSPQKAEIYLQGALKNYLAEGWALPITHTRKQLAECQKHLGQIENYLQTSSLLASERHLTESEREYFCREILSFAKRQADSPGHKIVLPMHSFAQLRDLHFTPSNAVVHVGGVLSVEITVCSQMPVPVHVEQIAINVHFSIEKNNYRKTAEWLTKHKTANGIVSFPAETAPFPTSQNSLPALELCEMFERSPSDNSLHTTGIICKNVHMLLRKQESGASLEAPSGAALEAGAHVLKCTAVTLEPGPNTITFRTQAREPGTYTLRQLCASVGPVWFVLPHIYPLVQYEVYSQEPQLHVEPLADSLLAGIPQKVKFTVTTGHYTVKHGDSLQLSNVEAMLILCHEESRAVIYSNMREKASDAPLRVQSSDKVTSISLPAAPAYHMIEFELEVLSLPSAPATGGESTMLGMTEPHGKHKDTHKAGHCMATMDHKVSIDCPWSIYSTVIALTFSMPFGTTHSLLSSGTRKYVQVCVQNLSELDFQLSDSHLVDTGDSTDLRLIPLNTESEQRIHSKQAVFFVWELKWTQEPPPSLHCRFSVGFSPASEERLSVSLKPYTYEFQVDNFLTLYSVRAEISPPPGTELCKTGSLCSLEVSITRLSDLSEADKDEALTECAEYFSTKLMYEVVDNSSNWAVCGKSSGVISMPVAARATHRVHMEVMPLFAGYLPLPDVRLFKYLPHHSAHSSQLDADSWIENDSLSVDKPVDDQLDSGSVQSRGSTRSAASSEHKGLPMPRLRALPPGQAFSASAGTQVLVVPSRDDHVLEVSVT*