Sequence detailsbmy_21206 (Coding sequence)

Part of scaffold_2833 (SequenceType object (1))

For more information consult the page for scaffold_2833 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PWP2ENSTTRG00000006728 (Bottlenosed dolphin)

Gene Details

PWP2 periodic tryptophan protein homolog (yeast)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006368, Bottlenosed dolphin)

Protein Percentage 96.6%
cDNA percentage 96.6%
Ka/Ks Ratio 0.10923 (Ka = 0.0145, Ks = 0.1326)

PWP2ENSBTAG00000007105 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009343, Cow)

Protein Percentage 93.57%
cDNA percentage 91.9%
Ka/Ks Ratio 0.07329 (Ka = 0.0289, Ks = 0.3941)

PWP2 (Minke Whale)

Gene Details

PWP2 periodic tryptophan protein homolog (yeast)

External Links

Gene match (Identifier: BACU004369, Minke Whale)

Protein Percentage 98.37%
cDNA percentage 98.33%
Ka/Ks Ratio 0.10952 (Ka = 0.0068, Ks = 0.0625)

Additional orthologs identified in other species via the OPTIC pipeline.

PWP2 (Human)   Pwp2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3024 bp    Location:64130..78630   Strand:+
Raw sequence 
>bmy_21206
ATGAAGTTCGCGTACCGGTTTTCAAATTTGCTGGGGACAGTCTATCGGTGTGGAAACTTAAATTTCACGTGTGATGGAAATTCAGTTATTAGTCCCGTGGGAAACAGAGTCACTGTGTTTGACCTAAAAAACACACCTGTTACTATTAAACAGGCGATGGAGACAGAGCCCCCTGATAGGGGGCTACGGGATTTACATAGTGCCGATGGGTCAGCAGTGGGATTGGCTGTAGGGATCCCGGGAGGGGCGGTTGAGGAGTCCGGGGCTCTGGCAGGCCTGGGGGGCGGGGAGACAGGTGCAGGGTGGGTGCTGCTGGTCCAGGCTGGCCCGGTCCCCCACCCCCGCCCGATGACACCAGAGCAGCAGCGCAGCTCTGGTTTTTTGTCTCCCAGCAACAAGTCCGACACTCTGCCTCTGGCCACTCGGTACAACATCAGGTGTGTGGGGCTGTCCCCGGACGGCCGCCTCGCCATCATTGTCGATGAAGGGGGTGACGCGCTGCTCGCCAGCCTGGTCTGCAGGGCCGTGCTGCACCGCTTCCACTTCAAGGGCGCTGTGCACAGCGTCTCCTTCTCCCCCGATGGCAGGAAATTTGTTGTCACCAAAGGCAACCTTGCTCAGATGTACCACGCCCCTGGGAGGAAGCGGGAATTCAACGCGTTTGTTCTGGACAAAACCTACTTCGGGCCGTACGATGAGACCACATGCATTGACTGGACAGACGACTCCCGGTGCTTTGCGGTCGGGAGCAAAGACATGTCCACGTGGGTGTTTGGGGCCGAGCGGTGGGACAACCTCATCTACTACGCGCTGGGGGGACACAAGGACGCCATCGTGGGCTGCTTCTTCGAGTCCAGCAGCCTGGACCTGTACACGCTCAGCCAGGACGGCGCCCTGTGCGTGTGGCAGTGTGACACCCCCCCTGAGGGCCTGAGGCTGAAAGCCCCCGCGGGCTGGAAGGCGGACCTGCTGCAGAGGGAGGACGAGGACGAGGACGAGGATGGGGACGGGGCGGAGGGGGAGACCACCATCCGCGGGAAGGCCGCGCCGGCCGCCGAGGAGCAGCGGGGCAAAGTGCAGTACTCGCGGGTGGCCAAGTACTTCTTCAATAAAGAAGGAGATTTCAACCATCTGACAGCTGCAGCGTATCACAAGAAGGTCCACCTCTTGGTCACTGGTTTTGCTTCCGGAATCTTCCACCTTCACGAGCTCCCGGAGTTCAACCTCATCCACTCCCTGAGTGTCTCGGATCAGAGGGTCTCGTCCATCGCCATCAACGGCTCTGGGGACTGGATCGCCTTCGGGTGCTCAGGCCTGGGCCAGCTGCTGGTGTGGGAGTGGCAGAGCGAGTCCTACGTGCTCAAGCAGCAGGGCCATTTCAACAGCATGGTGTCCCTGGCCTACTCCCCCGACGGGCAGTACATTGTGACCGGCGGGGACGACAGCAAGGTCAAGGTGTGGAACACCCTCAGTGGCTTCTGCTTCATCACTTTCACGGAGCACTCGAGTGGGGTCACCGGCGTGACCTTCACCACCACTGGCTACGTCATCGTGACCTCTTCCATGGACGGGACCGTGCGCGCCTTTGACCTTCACAGGTACCGCAACTTCCGCACCTTCACGTCCCCGCGCCCCACCCAGTTCTCCTGTGTGGCTGTGGACTCGAGCGGGGACATCGTCTCTGCTGGGGCCCAGGACTCTTTTGAGATCCTCATCTGGTCCATGCAGACAGGCAGGCTCCTGGACGTTTTGTCCGGCCACGAGGGGCCCATCAGTGGTCTGTGTTTTAACCCAATGAAGTCGGTCTTGGCCAGCGCCTCCTGGGACAGGACGGTACGTCTGTGGGACATGGCGGACAGCTGGAGGACCACAGAGACGCTGGCCCTCACCTCCGACGCTCTGGCCGTGACCTTTCGCCCTGACGGTGCCGAGCTGGCTGTGGCCACGCTGAACTCGCAGATCACCTTTTGGGACCCCGAAAGCGCGGTGCAGACGGGCTCCATCGAGGGCAGGCACGACCTCAAGACGGGAAGGAAGGAGCTGGACAAGATCACTGCCAAGCACTCGGCCAAGGGGAAGGCCTTCACCACTCTGTGCTACTCTGCGGACGGCCAGAGTATCCTGGCGGGAGGGATGTCCAAGTTTGTGTGCATCTATCACGTCAAGGAGCAGATTCTCAGGAAGAAGTTCGAGATCTCCTGCAACCTCTCTCTGGACGCCATGGAGGAATTTTTGAACCGAAGGAAAATGACAGAGTTTGGCAACCTGGCACTCATTGACCAAGACGCTACGGAGGAGGGCGGGGTCACGATACCGTTGCCGGGCGTAAAGAAGGGTGACATGAGCTCCCGGCACTTCAAACCTGAGATCAGGGTGACTTCGCTCCGCTTCTCTCCCACCGGGCGCTGCTGGGCGGCCACCACCACCGAGGGGCTGCTTATCTACTCCCTGGACGCCCGGATGCTCTTCGACCCGTTCGAGCTGGACAGCAGCGTGACGCCTGCGCAGATCCGGGCGGCACTGCGCCAGCGGGACTTCACCAGGGCCATCCCCATGGCCTTCCGGCTTCACGAGAGGAAGCTGCTGCAGGAGGCCCTGGAGTCGGTGCCCTGGGACCAGATTGGGGTCATCAGCTCCTCCCTGCCTGACTTGTACGTGGAGAAGGTGCTGGAATTTTTAGCTTCGTCCTTCGAAGAGTCTCGCCATCTAGAATTCTACCTCATATGGACTCAGAAATTGCTTATGGTCCACGGACAGAAGCTCAAGTCCAGAGTGGGGACACTGCTGCCGGCAGTTCAGTTCCTGCAGAAGAGCATCCAGCGCCACTGGGACGACGTCTCCAAACTCTGCGACTGGAACCGCTACAATATGCAGTACGCTCTGGCCGTTTCTAAGCAGCGGGGCCTGAAGCGGCCCTCGGAACCACCGGGCAGCGAGGAGGAAGCAGATGCATCCGAGGACGATGACAGCAGCCTGCACCTGCTCAGGAGAGGACCTGGGGATGGAGACGGGCCGCTGGCCTAG

Related Sequences

bmy_21206T0 SequenceType object (3)

Length: 1008 aa      View alignments
>bmy_21206T0
MKFAYRFSNLLGTVYRCGNLNFTCDGNSVISPVGNRVTVFDLKNTPVTIKQAMETEPPDRGLRDLHSADGSAVGLAVGIPGGAVEESGALAGLGGGETGAGWVLLVQAGPVPHPRPMTPEQQRSSGFLSPSNKSDTLPLATRYNIRCVGLSPDGRLAIIVDEGGDALLASLVCRAVLHRFHFKGAVHSVSFSPDGRKFVVTKGNLAQMYHAPGRKREFNAFVLDKTYFGPYDETTCIDWTDDSRCFAVGSKDMSTWVFGAERWDNLIYYALGGHKDAIVGCFFESSSLDLYTLSQDGALCVWQCDTPPEGLRLKAPAGWKADLLQREDEDEDEDGDGAEGETTIRGKAAPAAEEQRGKVQYSRVAKYFFNKEGDFNHLTAAAYHKKVHLLVTGFASGIFHLHELPEFNLIHSLSVSDQRVSSIAINGSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVSLAYSPDGQYIVTGGDDSKVKVWNTLSGFCFITFTEHSSGVTGVTFTTTGYVIVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDSSGDIVSAGAQDSFEILIWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLASASWDRTVRLWDMADSWRTTETLALTSDALAVTFRPDGAELAVATLNSQITFWDPESAVQTGSIEGRHDLKTGRKELDKITAKHSAKGKAFTTLCYSADGQSILAGGMSKFVCIYHVKEQILRKKFEISCNLSLDAMEEFLNRRKMTEFGNLALIDQDATEEGGVTIPLPGVKKGDMSSRHFKPEIRVTSLRFSPTGRCWAATTTEGLLIYSLDARMLFDPFELDSSVTPAQIRAALRQRDFTRAIPMAFRLHERKLLQEALESVPWDQIGVISSSLPDLYVEKVLEFLASSFEESRHLEFYLIWTQKLLMVHGQKLKSRVGTLLPAVQFLQKSIQRHWDDVSKLCDWNRYNMQYALAVSKQRGLKRPSEPPGSEEEADASEDDDSSLHLLRRGPGDGDGPLA*