Part of scaffold_2822 (Scaffold)

For more information consult the page for scaffold_2822 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFXL1 ENSTTRG00000003273 (Bottlenosed dolphin)

Gene Details

nuclear transcription factor, X-box binding-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003071, Bottlenosed dolphin)

Protein Percentage 72.54%
cDNA percentage 72.65%
Ka/Ks Ratio 0.19866 (Ka = 0.005, Ks = 0.0252)

NFXL1 ENSBTAG00000002201 (Cow)

Gene Details

NF-X1-type zinc finger protein NFXL1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053384, Cow)

Protein Percentage 95.84%
cDNA percentage 95.03%
Ka/Ks Ratio 0.1191 (Ka = 0.0197, Ks = 0.1653)

NFXL1  (Minke Whale)

Gene Details

nuclear transcription factor, X-box binding-like 1

External Links

Gene match (Identifier: BACU008745, Minke Whale)

Protein Percentage 99.08%
cDNA percentage 99.08%
Ka/Ks Ratio 0.15621 (Ka = 0.0041, Ks = 0.0262)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2943 bp    Location:182156..123192   Strand:-
>bmy_21212
GCCGGGTCAGTCTGCAGTTCTCCCGTCACGGCGCTCCCCCTGAGTCCGAGGAGGCGCTTTCCTCCTCCCCGGTTCTCCTTCTCCGGCGCTGGGTGCTCCTTGACTCGCGGTCCATTTCTCTGCCTAGTCCTCTCCCTCTTCGATCCATCTCCAAAGCCCGGGCTCAGCGGGGACTCGCCCTCTGGGAGAGACAGGGCCGCGACCTTTTCAAACTCGGTCCCCACCCCGCGGAGACCGCCCTCATTCCGCCTCTCACACCGGCTTCCCCCTCTGTCCTTTTTCCCCGCCTTGGTACCACCGCGCTCACGCTCCTTCCACTCTTTTTTTTTTTCCTCTGCAGGGATGGAAGCTTCCTGGCGCCAGGTGGCCAGTGGCCGAGGCCGAGCCCGAGGACGGGCCACTGCGGCCCCCTCCTCAGGAAATGGAGTCCATCTTCGCGGCGCCGGAGGAGGGCGAGAGAAGGGGTCGGTGGGCGCTGCTGGCCTTGGCCCCATTCCCGGTGGAGCTGCAACCTCTGCGGCTGCAGGTAGCTCAGCCCGGCGCAGCCCCGCGGGATCTGAAGCGCCGCAGACTTCCGTGGCCAGTGAGCTAATGTCTCAAAAGAAATTTGAGGAAATCAAGAAGGCTAATCAAGCTGCAGCCAAAAAACTTGTTGAAGAACACTTTAACTCTTCATCTGAAGAAGAAGGAGATGAGGATTTTGAAGGAAAAAGAGGAAAAATAGTTGCTAATACGTTTATAACTTACACTACTCAGACAGATGGAGATGTTCGTGAGTTAGAGCGAACAAAACAGTATGTAAATGAAGCTTTTCAAGCAGGGGCTATGACATGCTTAATTTGTATTGCTTCAGTGAAGAGAAACCAAGCAGTTTGGAGTTGTTCAGGATGTTTCTGTATATTTCACATGCCCTGTATCCAGAAGTGGGCTAAAGACAGTCAGTTTCTGGTGTCTTCTCCATTGACGGATGATGATTTTGGAAAGAGAGATTATCCCTGGCCTTGTCCAAAATGTAGGTTTGAATACAAACGATCTGACACACCTAGTAGGTACTATTGCTATTGTGGCAAAGTGGAAGATCCACCTTTAGATCCATGGCTTGTGCCTCATTCATGCGGCCAAGTATGTGAGAGAGATTTTAAACCTCCTTGTGGCCATAAGTGCTTACTCCTCTGCCATCCAGGTCCATGCCCTCCTTGTCCTAAGATGGTCACAACTACTTGTTATTGTAAGAAAGCAAAACCTATCCCTCGTCGGTGCAGTGCTAAGGAATGGTCCTGTCACCTGCCATGTGGACGGAAATTGCTTTGTGGACAGCATAAATGTGAAAATCCTTGTCATGCAGGAAGTTGCCCACCCTGTCCAAGAGTTAGTAGGCAAAAGTGTGTCTGTGGCAAACAAGTAGCTGAAAGAAGCTGTGCAAGTCCACTGTGGCACTGTGATCAAGTATGTGGGAAAACACTGCCATGTGGTAATCATACATGTGAGCAAGTTTGCCATGTAGGTGCTTGTGGAGAATGTCCTCGATCTGGGAAAAGGTTCTGTCCATGTCAGAAGTCAAAGTTTTCTTTGCCTTGTACAGAAGATGTACCAACTTGTGGAGACAGTTGTGACAAAGTACTTGAATGTGGAATCCACAGATGTTCACAGCGTTGTCACCGAGGTCCTTGTGAAACATGTAGACAAGAAGTGGAGAAGCATTGTCGTTGTGGAAAGCATACAAAACGAATGCCGTGTCATAAACCGTATCTTTGTGAAACTAAGTGTGTTAAGATGCGGGACTGTCAGAAGCATCAGTGTAGGAGAAAGGTGACAGTACCCTGTGGCCGAGAACGTACCACAAGACCCCCCAAGTGCAAAGAGCAGTGCAGTCGACCACCAACTTGCCATCATACAAGTCAAGAAAAACATCGCTGTCACTTTGGCTCTTGTCCTCCATGTCATCAACCTTGCCGAAAGGTTTTGGAGAAATGTGGTCACTTGTGTCCTGCTCCATGTCATGATCAAGCATTAATAAAGCAAACTGGCAGGCACCAGCCTTCAGGCCCTTGGGAACAGACTTCTGAACCAGCATTTATTCAGACTGCATTGCCTTGTCCTCCATGTCAAGTGCCTATTCCTATGGAATGTCTTGGGAAGCATGAGGTGAGCCCACTACCATGCCACACTGTAGGACCCTACTCTTGTAGGAGAGTTTGTGGACGAACCTTAGATTGTCAGAATCATACATGTATGAAAGAGTGCCACAAAGTAACTGAAATTGATTCCTGCACTGACAAAAACAAGGCTGGCCCAGAATGCCTTCAGTGTGAAGAAGGGTGCTCTAAATCACGGCCGCCAGGTTGTCCTCATCCGTGTGTTTTGCCATGTCACCCTGGAGAGTGTCCTCCCTGTGTTCAGATGCTTAGAGTAAAATGTCACTGCAAGATCACAAGTCTTTATGTGGAATGTAGAAAAATAACCACAGCTGATGTAAATGCAAAGAACCTCCTTAGTTGCTGCAAAAATCAGTGTCCTAAAGAGCTTCCTTGTGGTCATAGATGCAAAGAAATGTGCCATCCTGGTGAATGTCCCTTTAATTGCAACCAAAAGGTGAAACTTAGATGTCCTTGTAAAAGAATTAAAAAGGAATTGCAGTGCAACAAAGTACGTGAAAATCAGATTTCCATAGAATGTGACATAACGTGCAAGGAAATGAAGCGGAAAGCATCTGAGATAAAAGAAGCAGAAGCCAAAGCTGCTCTTGAAGAAGAAAAACGAAGACAACAGGCCGAACTGGAGGCTTTTGAAAACAGACTGAAGGGTCGTCGGAAGAAGAACAGGAAGAGAGATGAAGTGGCAGTTGAGCTAACGCTGTGGCAAAAATATAAATATTATCTCTTTCCAGTGTGTGCAGTTGTGGTTTTAGTGTTTGCATGGTACATAGCCCATGGTGTGGATTAA

Related Sequences

bmy_21212T0 Protein

Length: 981 aa      View alignments
>bmy_21212T0
AGSVCSSPVTALPLSPRRRFPPPRFSFSGAGCSLTRGPFLCLVLSLFDPSPKPGLSGDSPSGRDRAATFSNSVPTPRRPPSFRLSHRLPPLSFFPALVPPRSRSFHSFFFSSAGMEASWRQVASGRGRARGRATAAPSSGNGVHLRGAGGGREKGSVGAAGLGPIPGGAATSAAAGSSARRSPAGSEAPQTSVASELMSQKKFEEIKKANQAAAKKLVEEHFNSSSEEEGDEDFEGKRGKIVANTFITYTTQTDGDVRELERTKQYVNEAFQAGAMTCLICIASVKRNQAVWSCSGCFCIFHMPCIQKWAKDSQFLVSSPLTDDDFGKRDYPWPCPKCRFEYKRSDTPSRYYCYCGKVEDPPLDPWLVPHSCGQVCERDFKPPCGHKCLLLCHPGPCPPCPKMVTTTCYCKKAKPIPRRCSAKEWSCHLPCGRKLLCGQHKCENPCHAGSCPPCPRVSRQKCVCGKQVAERSCASPLWHCDQVCGKTLPCGNHTCEQVCHVGACGECPRSGKRFCPCQKSKFSLPCTEDVPTCGDSCDKVLECGIHRCSQRCHRGPCETCRQEVEKHCRCGKHTKRMPCHKPYLCETKCVKMRDCQKHQCRRKVTVPCGRERTTRPPKCKEQCSRPPTCHHTSQEKHRCHFGSCPPCHQPCRKVLEKCGHLCPAPCHDQALIKQTGRHQPSGPWEQTSEPAFIQTALPCPPCQVPIPMECLGKHEVSPLPCHTVGPYSCRRVCGRTLDCQNHTCMKECHKVTEIDSCTDKNKAGPECLQCEEGCSKSRPPGCPHPCVLPCHPGECPPCVQMLRVKCHCKITSLYVECRKITTADVNAKNLLSCCKNQCPKELPCGHRCKEMCHPGECPFNCNQKVKLRCPCKRIKKELQCNKVRENQISIECDITCKEMKRKASEIKEAEAKAALEEEKRRQQAELEAFENRLKGRRKKNRKRDEVAVELTLWQKYKYYLFPVCAVVVLVFAWYIAHGVD*