Part of scaffold_2822 (Scaffold)

For more information consult the page for scaffold_2822 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNGA1 ENSTTRG00000003276 (Bottlenosed dolphin)

Gene Details

cyclic nucleotide gated channel alpha 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003072, Bottlenosed dolphin)

Protein Percentage 80.57%
cDNA percentage 80.35%
Ka/Ks Ratio 0.13233 (Ka = 0.0069, Ks = 0.0525)

CNGA1 ENSBTAG00000002205 (Cow)

Gene Details

cGMP-gated cation channel alpha-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002853, Cow)

Protein Percentage 95.62%
cDNA percentage 94.44%
Ka/Ks Ratio 0.13338 (Ka = 0.0213, Ks = 0.1594)

CNGA1  (Minke Whale)

Gene Details

cyclic nucleotide gated channel alpha 1

External Links

Gene match (Identifier: BACU008746, Minke Whale)

Protein Percentage 98.03%
cDNA percentage 98.44%
Ka/Ks Ratio 0.23938 (Ka = 0.0081, Ks = 0.0337)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1779 bp    Location:203598..198367   Strand:-
>bmy_21213
GAACCAAAAGAAAAAAAGAAAAAGAAAAAAGAAAAGAAGCGCAAGCCAGATGATAAAAATGAAAATAAAAAGGGCCCAGAAAAGGAAAAGAAGAAAGAAAAGGACAAAGACAAGAAAAAAAAAGAGGAGAAAGGCAAAGACAAGAAAGAAGAGGAGAAGAAGAAAGTCGTGGTTATTGATCCCTCGGGAAACACATATTACAACTGGCTGTTTTGCATCACCTTACCTGTCATGTACAACTGGACCATGATTATTGCAAGAGCATGTTTTGATGAACTTCAGTCTGATTACCTAGAATATTGGCTCATTCTTGATTACTTATCAGATATAATCTATCTTCTCGATATGTTTGTACGAACAAGGACAGGTTACCTAGAACAAGGACTGCTGGTGAAGGAAGAGCTTAAACTCATAGAGAAATATAARTCAAACTTTCAATTTAAACTTGATGTTGTATCAGTGATACCAACTGATCTGCTGTATTTTAATCTGGGCTGGAACTATCCAGAAATTAGATTAAACAGACTGTTAAGGATCTCTCGAATGTTTGAGTTTTTCCAGAGAACGGAAACAAGGACAAACTACCCAAACATCTTCAGGATTTCTAACCTTGTTATGTATATTGTCATCATCATCCATTGGAATGCGTGTGTGTACTTCTCTATTTCCAAAGCTGTTGGATTTGGAAATGATACGTGGGTCTATCCTGATGTTAATGATCCTGAATTTGGCCGTTTGGCTAGAAAATATGTATACAGCCTTTACTGGTCTACACTGACTTTGACCACCATTGGTGAAACACCACCTCCTGTGAGGGATTCTGAGTATGTCTTTGTGGTGGCTGATTTCCTAATTGGAGTGTTAATTTTTGCCACCATTGTTGGTAACATAGGTTCTATGATTTCCAACATGAATGCAGCCAGAGCAGAATTTCAAGGAAGAATTGATGCGATCAAGCAATACATGCATTTTCGAAATGTAAGCAAAGATATGGAAAAGAGAGTTATTAAATGGTTTGACTATCTGTGGACCAACAAAAAAACAGTGGATGAGAGAGAAGTCTTGAAGTATCTACCTGATAAACTAAGAGCAGAGATTGCCATCAATGTTCACTTAGACACGTTAAAAAAGGTRCGCATTTTTGCCGACTGTGAAGCTGGTCTGTTGGTGGAGTTGGTCTTGAAATTACAACCCCAAGTCTACAGTCCTGGAGATTACATTTGCAAGAAAGGGGATATTGGACGAGAGATGTACATCATCAAGGAAGGTAAACTCGCCGTGGTGGCAGATGATGGAATCACTCAGTTTGTAGTATTGAGTGATGGCAGCTACTTTGGTGAGATCAGCATCCTTAACATTAAAGGCAGCAAAGCTGGCAATCGAAGAACGGCCAACATTAAAAGTATTGGCTACTCAGATCTGTTCTGTCTCTCAAAAGATGACCTCATGGAAGCTCTAACTGAGTACCCAGATGCCAAATGTATGCTAGAAGAGAAAGGGAAGCAAATCTTGATGAAAGATGGTCTACTGGACATAAACATTGCAAATGCTGGAAGTGATCCTAAAGATCTCGAAGAGAAGGTCAYTCGAATGGAGGGGTCAGTAGACCTCCTGCAAACAAAGTTTGCTCGGATCCTGGCTGAGTATGAGTCAATGCAGCAGAAACTGAAGCAAAGACTAACCAAGGTTGAGCAATTTCTGAAACCACTTATTGACACAGAATTTTCAGCTATTGAAGGATCTGGAGCTGAAAGCGGGCCCACAGACTCTACACAGGAC

Related Sequences

bmy_21213T0 Protein

Length: 593 aa      View alignments
>bmy_21213T0
EPKEKKKKKKEKKRKPDDKNENKKGPEKEKKKEKDKDKKKKEEKGKDKKEEEKKKVVVIDPSGNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLILDYLSDIIYLLDMFVRTRTGYLEQGLLVKEELKLIEKYKSNFQFKLDVVSVIPTDLLYFNLGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYFSISKAVGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYVFVVADFLIGVLIFATIVGNIGSMISNMNAARAEFQGRIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKCMLEEKGKQILMKDGLLDINIANAGSDPKDLEEKVXRMEGSVDLLQTKFARILAEYESMQQKLKQRLTKVEQFLKPLIDTEFSAIEGSGAESGPTDSTQD