Part of scaffold_2837 (Scaffold)

For more information consult the page for scaffold_2837 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD53 ENSTTRG00000016815 (Bottlenosed dolphin)

Gene Details

CD53 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015943, Bottlenosed dolphin)

Protein Percentage 84.82%
cDNA percentage 85.34%
Ka/Ks Ratio 0.41086 (Ka = 0.0127, Ks = 0.031)

CD53 ENSBTAG00000006466 (Cow)

Gene Details

Leukocyte surface antigen CD53

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008479, Cow)

Protein Percentage 90.58%
cDNA percentage 91.45%
Ka/Ks Ratio 0.29395 (Ka = 0.0579, Ks = 0.1971)

CD53  (Minke Whale)

Gene Details

CD53 molecule

External Links

Gene match (Identifier: BACU002718, Minke Whale)

Protein Percentage 99.48%
cDNA percentage 99.3%
Ka/Ks Ratio 0.09589 (Ka = 0.0023, Ks = 0.0237)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 669 bp    Location:188218..150019   Strand:-
>bmy_21218
ATGCCAGAGCCATGGAACTTCCCCTCCAGCCTCAAGCCTTACATTCCATCTCCTACAAGCCTGCAGCTCTACTCAGGGCAAGAATATCTCAGCATGGGCATGAGTAGCTTGAAATTGCTGAAGTATGTCCTGTTTTTCTTCAATTTGATCTTTTGGCTCTGTGGCTGTTGCATTTTGGGCTTTGGGATCTACCTCCTGATCCATAACAATTTTGGAGTGCTCTTCCATAACCTCCCCTCTCTCACGCTGGGCAATGTGCTTGTCATCGTGGGTTCCATTATCATGGTGGTTGCCTTCCTGGGCTGCATGGGATCCATCAAGGAGAATAAGTGCCTGCTTATGTCGTTCTTTGTCCTGCTGCTGATTATCCTCCTTGCTGAGGTGACCTTGGCCATCCTGCTCTTCGTGTATGAACAGAAGCTGAATGACTATGTGGCTGAGGGTCTGACTGACAGCATCCAGCAATATTACTCAGACAACAGCACCAAGGCGGCATGGGACTCCATCCAGTCATTTCTGCAATGTTGCGGTGTAAATGGCACGAGTGATTGGATGGGCAGCCCACCAGCATCTTGCCCCTCAGACCCACAAGTTAAGGTATTGGGGATGTCCTTTGCACTGACGTTGAATTGCCAGATTGACAAAACCAGCCAGGTCCTAGGATTATGA

Related Sequences

bmy_21218T0 Protein

Length: 223 aa      View alignments
>bmy_21218T0
MPEPWNFPSSLKPYIPSPTSLQLYSGQEYLSMGMSSLKLLKYVLFFFNLIFWLCGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVLVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLLLIILLAEVTLAILLFVYEQKLNDYVAEGLTDSIQQYYSDNSTKAAWDSIQSFLQCCGVNGTSDWMGSPPASCPSDPQVKVLGMSFALTLNCQIDKTSQVLGL*