Sequence details bmy_21230 (Coding sequence)

Part of scaffold_2834 (Scaffold)

For more information consult the page for scaffold_2834 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CBX6 ENSTTRG00000009409 (Bottlenosed dolphin)

Gene Details

chromobox homolog 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008922, Bottlenosed dolphin)

Protein Percentage 99.04%
cDNA percentage 98.8%
Ka/Ks Ratio 0.11557 (Ka = 0.0051, Ks = 0.0444)

CBX6 ENSBTAG00000046724 (Cow)

Gene Details

chromobox protein homolog 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055457, Cow)

Protein Percentage 93.96%
cDNA percentage 93.64%
Ka/Ks Ratio 0.10902 (Ka = 0.0295, Ks = 0.2704)

Additional orthologs identified in other species via the OPTIC pipeline.

CBX6 (Human)   Npcd (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1383 bp    Location:32404..40121   Strand:+
Raw sequence 
>bmy_21230
CCGCAGCTGGAACGCGAGCGCGCGCCCCGCCGCGCGCCCGCCCGCCGAGCCTGGGCGCTGTGGCGCGTGCGCGAGCGGTGCAGCACCGGCCGCGGGAGCAGGGAGTATTATGGGCTGTGGGTGCCGCTGAGCAAGATGGAGCTGTCTGCAGTGGGCGAGCGGGTCTTCGCGGCCGAATCCATCATCAAACGGCGGATCCGAAAGGGACGCATCGAGTACCTGGTGAAATGGAAGGGGTGGGCCATCAAGTACAGCACTTGGGAGCCGGAGGAGAACATCCTGGACTCGCGGCTCATTGCAGCCTTCGAGCAGAAGGAGAGGGAGCGTGAGCTGTATGGGCCCAAGAAGAGGGGACCCAAACCCAAAACTTTCCTCCTGAAGGCGCGGGCCCAGGCGGAGGCCCTCCGCATCAGTGATGTGCATTTCTCGGTCAAGCCGACCGCCAGCGCCTCTTCGCCCAAGCTGCATTCCAGCGCTGCCGTGCACCGGCTCAAGAAGGACATCCGCCGCTGCCACCGCATGTCCCGCCGCCCCCTGCCCCGCCCAGACCCCCAGGGGGGCAGCCCCGGCCTTCGCCCGCCCATCTCACCCTTCTCCGAGACCGTGCGCATCATCAACCGCAAGGTCAAGCCGCGGGAGCCCAAGCGGAACCGCATCATCCTGAACCTGAAGGTGATCGACAAGGGCACGGGCGGAGGCGGCGCCGGGCAGGGGGCCGGGGCCCTTGCCCGCCCCAAAGTCCCTTCACGGAACCGCGTCATCGGCAAGAGCAAGAAGTTCAGCGAGAGCATCCTGCGCACGCAGATCCGCCACATGAAGTTCGGCGCTTTCGCGATGTACAACAAGCCCCCGCCCGGCCCTCTGCCGCCCCCGCCGGCCACCAAGGCCGACATCGCCGCCTCCCCTGGCCAGGGGCTGCTCCTGGCAGCCCCCAGTGCCCCGTACGACGCCCGCAGCTCCAGCTCCTCCGGCTGCCCTTCGCCGACCCCGCAGTCCTCCTCCGACCCGGATGACGCGCCCCCCAAGCTGCTCCCCGAGACCACGAGTCCATCTGCCCCCGACTGGCGGGAGCCCGAGGTGCTTGACCTGTCCATCCCTCCCGAGGCGGCGGCCACCAGCAAGCGGGCGCCTCCCGATGTCACTGCGGCTGCCAGCCAGGCCCTTCCCGCGGCCCCTCAGCCTGCCGGCGCCGCCTCAGAGCCCGAGGCTGGAGACTGGCGCCCTGAGATGTCACCCTGCTCCAACGTGGTCGTCACCGATGTCACCAGCAATCTCCTGACGGTCACTATCAAGGAATTCTGCAACCCTGAGGATTTCGAGAAGGTGGCTGCTGGGGTAGCAGGCGCCGCAGCGGGGGGTGGCAGCAGTGGGCAGAGCAAGTGA

Related Sequences

bmy_21230T0 Protein

Length: 461 aa      View alignments
>bmy_21230T0
PQLERERAPRRAPARRAWALWRVRERCSTGRGSREYYGLWVPLSKMELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPKKRGPKPKTFLLKARAQAEALRISDVHFSVKPTASASSPKLHSSAAVHRLKKDIRRCHRMSRRPLPRPDPQGGSPGLRPPISPFSETVRIINRKVKPREPKRNRIILNLKVIDKGTGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESILRTQIRHMKFGAFAMYNKPPPGPLPPPPATKADIAASPGQGLLLAAPSAPYDARSSSSSGCPSPTPQSSSDPDDAPPKLLPETTSPSAPDWREPEVLDLSIPPEAAATSKRAPPDVTAAASQALPAAPQPAGAASEPEAGDWRPEMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFEKVAAGVAGAAAGGGSSGQSK*