Part of scaffold_2834 (Scaffold)

For more information consult the page for scaffold_2834 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPTXR ENSTTRG00000021416 (Bottlenosed dolphin)

Gene Details

neuronal pentraxin receptor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016557, Bottlenosed dolphin)

Protein Percentage 92.74%
cDNA percentage 93.95%
Ka/Ks Ratio 0.21437 (Ka = 0.0394, Ks = 0.1836)

NPTXR ENSBTAG00000000109 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014522, Cow)

Protein Percentage 95.38%
cDNA percentage 92.74%
Ka/Ks Ratio 0.0843 (Ka = 0.0274, Ks = 0.3248)

NPTXR  (Minke Whale)

Gene Details

neuronal pentraxin receptor

External Links

Gene match (Identifier: BACU013370, Minke Whale)

Protein Percentage 99.62%
cDNA percentage 98.87%
Ka/Ks Ratio 0.02979 (Ka = 0.0016, Ks = 0.0535)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 912 bp    Location:71940..80560   Strand:+
>bmy_21231
CCTCGTGTGTCCCTTTCTGTGCCCCGTGAGCAGCAGGAGCTTCCAGCCCGGGTGAACTTCTCAGCGGCCCCGGCCCCTGCGCCCGTGGTGCCCACCGCCCTGCACTCCAAGATGGATGAGCTAGAGGGGCAGCTGCTGGCCAAGGTGCTGGCGCTGGAGAAGGAGCGCGTGGCCCTCAGTCACAGCAGCCAGCAGCAGCGGCAGGAAGTGGAGAAGGAGCTGGACGCCCTGCAGGACCGTGTCGCGGAACTGGAGCACGGGTCCTCAGCCTACAGTCCCCCAGATGCCTTCAAGATCAGCATCCCCATCCGCAACAACTACATGTACGCCCGCGTGCGCAAGGCACTGCCCGAGCTCTACGCCTTCAGCGTCTGCATGTGGCTGCGGTCCAGGTCGGGCGGCACTGGCCAGGGCACCCCCTTCTCCTACTCGGTGCCTGGGCAGGCCAACGAGATTGTGCTGCTGGAGGCGGGCCATGACCCCATGGAGCTGCTGATCAATGACAAGGTGGCCCAGCTGCCCCTGAGCCTGAAGGACAATGGCTGGCACCACATCTGCCTCTCCTGGACCACAAGGGACGGCCTGTGGTCTGCCTACCAGGATGGAGAGCTGCGGGGCTCTGGTGAGAACCTGGCCGCCTGGCACCCCATCAAGCCTCATGGGATCCTTATCCTGGGCCAAGAGCAGGATACCCTAGGTGGCCGGTTTGATGCCACCCAGGCCTTCGTGGGTGACATTGCCCAGTTTAACCTCTGGGACCACACCCTGACACCTGCCCAGGTCCTGGGCATTGCCAACTGTACGGGGCCGCTGCTGGGCAACATCATCCCCTGGGAAGACAAGCTGGTGGAGGCCTTTGGGGGTGCAACGAAGGCCGCCTTCGATGTCTGCAAGGGACAGGCCAAGGCATGA

Related Sequences

bmy_21231T0 Protein

Length: 304 aa      View alignments
>bmy_21231T0
PRVSLSVPREQQELPARVNFSAAPAPAPVVPTALHSKMDELEGQLLAKVLALEKERVALSHSSQQQRQEVEKELDALQDRVAELEHGSSAYSPPDAFKISIPIRNNYMYARVRKALPELYAFSVCMWLRSRSGGTGQGTPFSYSVPGQANEIVLLEAGHDPMELLINDKVAQLPLSLKDNGWHHICLSWTTRDGLWSAYQDGELRGSGENLAAWHPIKPHGILILGQEQDTLGGRFDATQAFVGDIAQFNLWDHTLTPAQVLGIANCTGPLLGNIIPWEDKLVEAFGGATKAAFDVCKGQAKA*