Sequence detailsbmy_21234 (Coding sequence)

Part of scaffold_2834 (SequenceType object (1))

For more information consult the page for scaffold_2834 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTPBP1ENSTTRG00000005629 (Bottlenosed dolphin)

Gene Details

GTP binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005312, Bottlenosed dolphin)

Protein Percentage 97.58%
cDNA percentage 96.83%
Ka/Ks Ratio 0.13147 (Ka = 0.0133, Ks = 0.1012)

GTPBP1ENSBTAG00000010324 (Cow)

Gene Details

GTP-binding protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013635, Cow)

Protein Percentage 97.06%
cDNA percentage 93.26%
Ka/Ks Ratio 0.04894 (Ka = 0.0152, Ks = 0.31)

GTPBP1 (Minke Whale)

Gene Details

GTP binding protein 1

External Links

Gene match (Identifier: BACU019044, Minke Whale)

Protein Percentage 98.27%
cDNA percentage 97.58%
Ka/Ks Ratio 0.12657 (Ka = 0.01, Ks = 0.0792)

Additional orthologs identified in other species via the OPTIC pipeline.

GTPBP1 (Human)   Gtpbp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1740 bp    Location:173486..142297   Strand:-
Raw sequence 
>bmy_21234
ATGAAGCACAAAGCAAGGAAACTTCTTGTCCGAGATGGGACTGAGTACGGGCTGAGTGAAGCTGACATGGAGGCCTCCTACGCCACAGTGAAGAGCATGGCAGAACAAATAGAGGCTGATGTCATCCTCCTCCGGGAACGTCAAGAAGCTGGGGGCCGTGTGCGTGATTACCTGGTCCGGAAACGAGTAGGAGACAATGACTTCCTGGAAGTCAGGGTAGCGGTAGTGGGCAACGTGGATGCCGGCAAAAGCACGCTTCTGGGGGTCCTGACCCACGGAGAGCTGGACAACGGCCGAGGCTTCGCCCGCCAGAAACTCTTCCGCCACAAACATGAGATTGAATCTGGTCGCACCAGCAGTGTGGGCAATGACATTCTGGGCTTTGACAGTGAAGGCAATGTGGTAAACAAGCCAGACAGCCATGGTGGCAGCCTGGAGTGGACAAAGATCTGTGAGAAATCCACTAAGGTGATTACTTTCATCGACTTGGCTGGCCATGAGAAGTACCTGAAGACCACTGTCTTTGGCATGACCGGCCATTTACCTGACTTCTGCATGCTCATGGTGGGCAGCAATGCTGGCATCGTGGGGATGACAAAGGAGCACCTGGGCTTGGCATTGGCACTCAATGTGCCTGTCTTTGTGGTGGTCACCAAGATTGACATGTGTCCTGCCAACATCCTGCAAGAAACCCTGAAGCTGTTACAGCGCCTGCTAAAGTCTCCCGGCTGCCGCAAGATCCCTGTGTTGGTGCAGAGCAAGGATGATGTGATTGTTACAGCCTCCAACTTCAGCTCTGAGAGGATGTGCCCGATATTCCAAATCTCCAACGTTACAGGCGAGAACCTAGATCTGCTGAAGATGTTCCTCAACCTGCTCTCGCCTCGCACCAGTTACCGGGAGGAGGAGCCTGCTGAGTTTCAGATTGACGACACCTACTCTGTCCCGGGTGTGGGAACAGTGGTGTCGGGGACAACGCTGAGGGGCCTGATCAAGCTGAATGACACGCTGCTGCTGGGCCCAGATCCTTTGGGTAACTTCCTGTCCATTGCTGTCAAATCGATCCATCGCAAGCGCATGCCTGTCAAGGAGGTGCGGGGGGGCCAGACGGCCTCCTTCGCACTGAAGAAGATCAAGCGCTCGTCCATCCGGAAGGGCATGGTGATGGTTTCTCCACGCTTGAATCCCCAAGCATCCTGGGAGTTCGAGGCCGAGATCCTCGTCCTTCACCACCCCACCACAATCAGCCCGCGGTACCAGGCCATGGTGCACTGTGGGAGCATCAGGCAGACAGCCACCATCCTGAGCATGGACAAGGACTGCCTGCGCACCGGGGACAAGGCCACCGTGCATTTCCGCTTCATCAAGACCCCCGAGTACCTGCACATAGACCAGCGGCTGGTGTTCCGGGAGGGCCGCACCAAGGCTGTAGGCACCATCACTAAGCTCCTCCAGACCACCAACAATTCCCCAATGAACTCCAAACCCCAGCAGATTAAAATGCAATCGACGAAAAAGGGTCCCCTGCCCAAACGAGAAGAGGGAGGTCCCTCTGGAGGGCCAGCAGTAGGGGCACCCCCAACGGGAGATGAAGCTTGCTCTCTAGCGGCTGCGCAGCCAGCTGCATCCGGCAGCCTCCAGCCACAGCCCAAGCCCAGCAGCGGGGGCCGGCGACGGGGGGGCCAGCGTCACAAGGTGAAGTCCCAGGGGGCCTGCATGCCTCCCGCCAGCGGCTGCTGA

Related Sequences

bmy_21234T0 SequenceType object (3)

Length: 580 aa      View alignments
>bmy_21234T0
MKHKARKLLVRDGTEYGLSEADMEASYATVKSMAEQIEADVILLRERQEAGGRVRDYLVRKRVGDNDFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLLKMFLNLLSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLNPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLPKREEGGPSGGPAVGAPPTGDEACSLAAAQPAASGSLQPQPKPSSGGRRRGGQRHKVKSQGACMPPASGC*