Part of scaffold_2861 (Scaffold)

For more information consult the page for scaffold_2861 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SRD5A1 ENSTTRG00000012679 (Bottlenosed dolphin)

Gene Details

steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012027, Bottlenosed dolphin)

Protein Percentage 96.62%
cDNA percentage 96.62%
Ka/Ks Ratio 0.14982 (Ka = 0.0153, Ks = 0.1023)

SRD5A1 ENSBTAG00000015478 (Cow)

Gene Details

3-oxo-5-alpha-steroid 4-dehydrogenase 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020570, Cow)

Protein Percentage 91.22%
cDNA percentage 88.51%
Ka/Ks Ratio 0.10464 (Ka = 0.046, Ks = 0.4396)

SRD5A1  (Minke Whale)

Gene Details

steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)

External Links

Gene match (Identifier: BACU019989, Minke Whale)

Protein Percentage 97.66%
cDNA percentage 97.4%
Ka/Ks Ratio 0.23337 (Ka = 0.0148, Ks = 0.0635)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 447 bp    Location:67971..82250   Strand:+
>bmy_21294
ATGCCATTGTACACCTTTATGCTGGCATTCATGTTCTGCACCTATAATGGCTACTTGCAGAGCAGATACTTGAGCCAGTATGCGGTCTATGCTGACAACTGGCTCGCTGACCCCCGATTTCTAACAGGTTTTGTCTTGTGGTTGTTAGGCATGCTGATAAACATCCATTCAGATCATGTCCTAAGGAACCTCAGGAAACCAGGGGAGACTGGATATAAAATACCAAAGGGGGGCTTGTTTGAATACATCACTGCAGCCAACTACTTCGGAGAGGTCGTCGAGTGGTGCGGCTACGCCCTCGCCAGCTGGTCTATCCAAGGCTGGGCTTTTGCTGTGTTCACCTTCTGTGTCCTGCTCACCAGGGCTCAGCAGCATCACCAGTGGTACCATGAGAAATTTGAAGACTATCCAAAATTCAGAAAAATTATGATTCCATTTTTGTTTTAA

Related Sequences

bmy_21294T0 Protein

Length: 149 aa      View alignments
>bmy_21294T0
MPLYTFMLAFMFCTYNGYLQSRYLSQYAVYADNWLADPRFLTGFVLWLLGMLINIHSDHVLRNLRKPGETGYKIPKGGLFEYITAANYFGEVVEWCGYALASWSIQGWAFAVFTFCVLLTRAQQHHQWYHEKFEDYPKFRKIMIPFLF*