Part of scaffold_2861 (Scaffold)

For more information consult the page for scaffold_2861 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PAPD7 ENSTTRG00000012547 (Bottlenosed dolphin)

Gene Details

PAP associated domain containing 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011906, Bottlenosed dolphin)

Protein Percentage 97.41%
cDNA percentage 96.73%
Ka/Ks Ratio 0.11471 (Ka = 0.0084, Ks = 0.0736)

PAPD7 ENSBTAG00000003381 (Cow)

Gene Details

DNA polymerase sigma

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004384, Cow)

Protein Percentage 93.16%
cDNA percentage 90.57%
Ka/Ks Ratio 0.07866 (Ka = 0.0325, Ks = 0.4135)

PAPD7  (Minke Whale)

Gene Details

PAP associated domain containing 7

External Links

Gene match (Identifier: BACU014710, Minke Whale)

Protein Percentage 99.0%
cDNA percentage 98.86%
Ka/Ks Ratio 0.13266 (Ka = 0.0044, Ks = 0.0333)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1629 bp    Location:160007..178356   Strand:+
>bmy_21296
ATGTCCCCTTGTCCTGAAGAAGCAGCCATGAGAAGAGAGGTGGTGAAAAGGATCGAAACTGTGGTTAAAGATCTTTGGCCGACGGCTGATGTGCAGATATTTGGCAGCTTCAGCACGGGCCTCTATCTTCCCACCAGCGACATCGACTTAGTGGTCTTTGGAAAATGGGAGCGCCCTCCGCTGCAGCTGTTGGAGCAGGCCCTGCGGAAACACAGCGTGGCCGAGCCGGGCTCCATCAAGGTCCTCGACAAGGCGACGGTACCGATAATAAAACTCACAGACCAGGAGACGGAAGTTAAAGTCGACATCAGCTTTAACATGGAGACTGGGGTCCGGGCAGCAGAGTTCATCAAGAATTACATGAAGAAATATTCATTGCTGCCTTACTTGATTTTAGTACTGAAACAGTTCCTCCTGCAGAGGGACCTGAATGAAGTTTTTACAGGTGGAATTAGCTCGTACAGCCTAATTTTAATGGCCATCAGCTTTCTACAGTTGCATCCAAGAATTGATGCCCGGAGAGCTGATGAAAACCTTGGAATGCTTCTTGTAGAATTTTTTGAACTCTACGGAAGAAATTTTAATTACTTGAAAACTGGTATTAGAATAAAAGAAGGAGGTGCCTATATCGCCAAAGAGGAGATCATGAAAGCCATGACCAGCGGGTACAGGCCATCGATGCTGTGCATTGAGGACCCCCTGCTGCCTGGGAACGACGTGGGCCGGAGCTCCTACGGGGCCATGCAAGTGAAGCAGGTRTTCGACTACGCCTACATCGTTCTCAGCCACGCCGTGTCGCCGCTCGCCAGGTCCTATCCCAACAGAGATTCCGAAAGCACCTTAGGGAGGATCATCAAGGTGACCCAGGAGGTGATCGACTACCGGGCGTGGATCAAGGAGAAGTGGGGCAGCCGGGCCCACGCGGCGCCAGACCCTGACGACAGGATTAAGACCACCGAGCGGGTGGGCGCGTGCGAGGGGGAGCAGCCTCCGCGCCGGGACCCCGAGTCGCCCTGCGGCCCGCGCCTGGCCCTGTCCCTGCCCAGCCCCCAGCTGCTGTCCTCCGGCTCGTCCGCCTCCTCCGTGTCCTCGCTCTCCGGAAGCGACATCGATTCGGACACGCCCCCCTGCCCGACGCCCAGCGTGCGCCAGTTCAGCCTCCAGGCACCTGCCCCTCTGCCGGCCAGCCTGCCCGCCGCCCTGCCCGTGCCGAGTGGCAGACCTCAGCCCGCCACACCCAGGACGCTGGTCATGGCAACTAATACCCAGACCAGGTTTACTATACCTCCACCAACGCTCGGGGTGGCCCCCGTGCCCTGTAGACCAGCTGGCATCGAAGGAGCTCCGGCGCTGAAAGCTGTCCACCACGTGTCTTCCCCGGCCGTCCCGTCTGCGCCCCCCAACGCGCTCTCCAGCCCTCACCTGTATCACAAGCAGCACAGCGGCATGAAACTGTCCATGAAGGGCTCCCACAGCCACGGCCAAGGCGGCAGCTACAGCGCGGTGGGCAGCGGAGGAGTGCGGCCCCCCGTGGGCAACCGGGGGCACCACCAGTACAACCGCGCCGGCTGGAGGAGGAGAAAACACACACACACGAGGGACAGCCTGCCCGTCAGTCTCAGCAGATAA

Related Sequences

bmy_21296T0 Protein

Length: 543 aa      View alignments
>bmy_21296T0
MSPCPEEAAMRREVVKRIETVVKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLEQALRKHSVAEPGSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGMLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPLARSYPNRDSESTLGRIIKVTQEVIDYRAWIKEKWGSRAHAAPDPDDRIKTTERVGACEGEQPPRRDPESPCGPRLALSLPSPQLLSSGSSASSVSSLSGSDIDSDTPPCPTPSVRQFSLQAPAPLPASLPAALPVPSGRPQPATPRTLVMATNTQTRFTIPPPTLGVAPVPCRPAGIEGAPALKAVHHVSSPAVPSAPPNALSSPHLYHKQHSGMKLSMKGSHSHGQGGSYSAVGSGGVRPPVGNRGHHQYNRAGWRRRKHTHTRDSLPVSLSR*